Analysis of interatomic Contacts of Structural Units in PDB entry:
6JXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JXG entry

There is 1 chain in PDB entry 6JXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1SER 713
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6JXG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 18Right-handed alpha
Helix 2
AA2
A
21 30Right-handed alpha
Helix 3
AA3
A
46 50Right-handed 310
Helix 4
AA4
A
74 80Right-handed alpha
Helix 5
AA5
A
83 101Right-handed alpha
Helix 6
AA6
A
122 126Right-handed 310
Helix 7
AA7
A
130 148Right-handed alpha
Helix 8
AA8
A
174 181Right-handed alpha
Helix 9
AA9
A
183 192Right-handed alpha
Helix 10
AB1
A
210 212Right-handed 310
Helix 11
AB2
A
213 218Right-handed alpha
Helix 12
AB3
A
238 246Right-handed alpha
Helix 13
AB4
A
264 273Right-handed alpha
Helix 14
AB5
A
277 295Right-handed alpha
Helix 15
AB6
A
322 333Right-handed alpha
Helix 16
AB7
A
341 343Right-handed 310
Helix 17
AB8
A
357 360Right-handed 310
Helix 18
AB9
A
369 373Right-handed 310
Helix 19
AC1
A
395 407Right-handed alpha
Helix 20
AC2
A
418 428Right-handed alpha
Helix 21
AC3
A
462 472Right-handed alpha
Helix 22
AC4
A
489 494Right-handed alpha
Helix 23
AC5
A
510 520Right-handed alpha
Helix 24
AC6
A
536 541Right-handed 310
Helix 25
AC7
A
558 565Right-handed alpha
Helix 26
AC8
A
608 610Right-handed 310
Helix 27
AC9
A
673 676Right-handed 310
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There are 8 sheets in PDB entry 6JXG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
55 57anti-parallel
Strand 3
A
105 106parallel
Strand 4
A
151 157parallel
Strand 5
A
196 199parallel
Strand 6
A
228 231parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
203 204parallel
Strand 3
A
207 208anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 339first strand
Strand 2
A
498 503anti-parallel
Strand 3
A
477 483parallel
Strand 4
A
431 438parallel
Strand 5
A
351 355parallel
Strand 6
A
410 414parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
450 451anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 591first strand
Strand 2
A
612 622anti-parallel
Strand 3
A
663 671anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 602first strand
Strand 2
A
605 606anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
649 658first strand
Strand 2
A
628 637anti-parallel
Strand 3
A
692 698anti-parallel
Strand 4
A
704 711anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
677 679first strand
Strand 2
A
684 686anti-parallel
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