Analysis of interatomic Contacts of Structural Units in PDB entry:
6JXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JXK entry

There are 3 chains in PDB entry 6JXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 47TYR 1033
B
 TYR 20LYS 290
F
 ASP 25TYR 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 6JXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 62Right-handed alpha
Helix 2
AA2
A
75 80Right-handed alpha
Helix 3
AA3
A
80 85Right-handed alpha
Helix 4
AA4
A
98 103Right-handed alpha
Helix 5
AA5
A
115 120Right-handed alpha
Helix 6
AA6
A
142 158Right-handed alpha
Helix 7
AA7
A
165 169Right-handed 310
Helix 8
AA8
A
192 194Right-handed 310
Helix 9
AA9
A
224 229Right-handed alpha
Helix 10
AB1
A
274 285Right-handed alpha
Helix 11
AB2
A
291 321Right-handed alpha
Helix 12
AB3
A
325 341Right-handed alpha
Helix 13
AB4
A
344 363Right-handed alpha
Helix 14
AB5
A
369 375Right-handed 310
Helix 15
AB6
A
424 437Right-handed alpha
Helix 16
AB7
A
459 473Right-handed alpha
Helix 17
AB8
A
519 525Right-handed alpha
Helix 18
AB9
A
542 554Right-handed alpha
Helix 19
AC1
A
555 557Right-handed 310
Helix 20
AC2
A
607 618Right-handed alpha
Helix 21
AC3
A
629 641Right-handed alpha
Helix 22
AC4
A
649 657Right-handed alpha
Helix 23
AC5
A
660 664Right-handed 310
Helix 24
AC6
A
665 669Right-handed 310
Helix 25
AC7
A
675 681Right-handed alpha
Helix 26
AC8
A
683 694Right-handed alpha
Helix 27
AC9
A
703 716Right-handed alpha
Helix 28
AD1
A
730 736Right-handed alpha
Helix 29
AD2
A
748 755Right-handed alpha
Helix 30
AD3
A
765 791Right-handed alpha
Helix 31
AD4
A
791 805Right-handed alpha
Helix 32
AD5
A
812 822Right-handed alpha
Helix 33
AD6
A
825 830Right-handed alpha
Helix 34
AD7
A
831 834Right-handed 310
Helix 35
AD8
A
839 843Right-handed 310
Helix 36
AD9
A
855 865Right-handed alpha
Helix 37
AE1
A
865 886Right-handed alpha
Helix 38
AE2
A
888 893Right-handed alpha
Helix 39
AE3
A
895 900Right-handed alpha
Helix 40
AE4
A
916 946Right-handed alpha
Helix 41
AE5
A
952 957Right-handed alpha
Helix 42
AE6
A
963 981Right-handed alpha
Helix 43
AE7
A
983 988Right-handed alpha
Helix 44
AE8
A
995 1000Right-handed alpha
Helix 45
AE9
A
1002 1022Right-handed alpha
Helix 46
AF1
A
1025 1030Right-handed alpha
Helix 47
AF2
B
35 66Right-handed alpha
Helix 48
AF3
B
106 115Right-handed alpha
Helix 49
AF4
B
116 120Right-handed 310
Helix 50
AF5
B
155 163Right-handed 310
Helix 51
AF6
B
219 223Right-handed 310
Helix 52
AF7
B
225 229Right-handed 310
Helix 53
AF8
F
33 66Right-handed alpha
Helix 54
AF9
F
106 118Right-handed alpha
Helix 55
AG1
F
119 121Right-handed 310
Helix 56
AG2
F
155 163Right-handed 310
Helix 57
AG3
F
219 223Right-handed 310
Helix 58
AG4
F
225 229Right-handed 310
Helix 59
AG5
E
51 55Right-handed 310
Helix 60
AG6
E
56 65Right-handed alpha
Helix 61
AG7
E
80 85Right-handed alpha
Helix 62
AG8
E
108 130Right-handed alpha
Helix 63
AG9
E
132 135Right-handed 310
Helix 64
AH1
E
136 155Right-handed alpha
Helix 65
AH2
E
165 169Right-handed 310
Helix 66
AH3
E
192 194Right-handed 310
Helix 67
AH4
E
224 229Right-handed alpha
Helix 68
AH5
E
280 285Right-handed alpha
Helix 69
AH6
E
291 322Right-handed alpha
Helix 70
AH7
E
325 341Right-handed alpha
Helix 71
AH8
E
344 362Right-handed alpha
Helix 72
AH9
E
371 379Right-handed alpha
Helix 73
AI1
E
424 437Right-handed alpha
Helix 74
AI2
E
450 454Right-handed 310
Helix 75
AI3
E
459 473Right-handed alpha
Helix 76
AI4
E
476 482Right-handed alpha
Helix 77
AI5
E
520 525Right-handed 310
Helix 78
AI6
E
545 550Right-handed alpha
Helix 79
AI7
E
554 558Right-handed 310
Helix 80
AI8
E
607 612Right-handed alpha
Helix 81
AI9
E
612 618Right-handed alpha
Helix 82
AJ1
E
629 641Right-handed alpha
Helix 83
AJ2
E
649 658Right-handed alpha
Helix 84
AJ3
E
677 682Right-handed alpha
Helix 85
AJ4
E
686 694Right-handed alpha
Helix 86
AJ5
E
704 716Right-handed alpha
Helix 87
AJ6
E
727 730Right-handed 310
Helix 88
AJ7
E
731 736Right-handed alpha
Helix 89
AJ8
E
765 791Right-handed alpha
Helix 90
AJ9
E
791 805Right-handed alpha
Helix 91
AK1
E
812 822Right-handed alpha
Helix 92
AK2
E
825 830Right-handed alpha
Helix 93
AK3
E
839 843Right-handed 310
Helix 94
AK4
E
855 885Right-handed alpha
Helix 95
AK5
E
888 893Right-handed alpha
Helix 96
AK6
E
895 900Right-handed alpha
Helix 97
AK7
E
916 946Right-handed alpha
Helix 98
AK8
E
961 979Right-handed alpha
Helix 99
AK9
E
983 989Right-handed alpha
Helix 100
AL1
E
994 999Right-handed alpha
Helix 101
AL2
E
1001 1021Right-handed alpha
Helix 102
AL3
E
1025 1032Right-handed alpha
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There are 19 sheets in PDB entry 6JXK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
189 190anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
180 182anti-parallel
Strand 3
A
199 203anti-parallel
Strand 4
A
257 269anti-parallel
Strand 5
A
211 223anti-parallel
Strand 6
A
234 236anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
180 182anti-parallel
Strand 3
A
199 203anti-parallel
Strand 4
A
257 269anti-parallel
Strand 5
A
211 223anti-parallel
Strand 6
A
251 252anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
757 759anti-parallel
Strand 3
A
739 743parallel
Strand 4
A
721 725parallel
Strand 5
A
381 384parallel
Strand 6
A
621 625parallel
Strand 7
A
696 699parallel
Strand 8
A
671 674parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 408first strand
Strand 2
A
396 402anti-parallel
Strand 3
A
598 601anti-parallel
Strand 4
A
560 569anti-parallel
Strand 5
A
512 518anti-parallel
Strand 6
A
497 502anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 408first strand
Strand 2
A
396 402anti-parallel
Strand 3
A
598 601anti-parallel
Strand 4
A
560 569anti-parallel
Strand 5
A
592 594anti-parallel
Strand 6
A
527 530parallel
Strand 7
A
537 538anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 442first strand
Strand 2
A
456 457anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 85first strand
Strand 2
B
178 183anti-parallel
Strand 3
B
244 249anti-parallel
Strand 4
B
215 216anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 90first strand
Strand 2
B
93 97anti-parallel
Strand 3
B
283 287parallel
Strand 4
B
257 265anti-parallel
Strand 5
B
198 203anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
82 85first strand
Strand 2
F
178 183anti-parallel
Strand 3
F
244 249anti-parallel
Strand 4
F
215 218anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
89 90first strand
Strand 2
F
93 99anti-parallel
Strand 3
F
283 289parallel
Strand 4
F
258 265anti-parallel
Strand 5
F
198 203anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
177 178first strand
Strand 2
E
189 190anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
181 182first strand
Strand 2
E
185 186anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
202 203first strand
Strand 2
E
258 263anti-parallel
Strand 3
E
217 223anti-parallel
Strand 4
E
233 236anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
251 252first strand
Strand 2
E
211 213anti-parallel
Strand 3
E
266 269anti-parallel
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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
365 367first strand
Strand 2
E
757 759anti-parallel
Strand 3
E
739 743parallel
Strand 4
E
721 725parallel
Strand 5
E
381 384parallel
Strand 6
E
621 625parallel
Strand 7
E
696 699parallel
Strand 8
E
671 674parallel
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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
406 408first strand
Strand 2
E
396 401anti-parallel
Strand 3
E
592 601anti-parallel
Strand 4
E
560 567anti-parallel
Strand 5
E
512 518anti-parallel
Strand 6
E
497 503anti-parallel
Strand 7
E
485 489anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
406 408first strand
Strand 2
E
396 401anti-parallel
Strand 3
E
592 601anti-parallel
Strand 4
E
527 530parallel
Strand 5
E
537 538anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
907 908first strand
Strand 2
E
914 915anti-parallel
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