Analysis of interatomic Contacts of Structural Units in PDB entry:
6JZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JZL entry

There are 2 chains in PDB entry 6JZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3GLY 278
B
 MET 1GLY 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6JZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 42Right-handed 310
Helix 2
AA2
A
59 66Right-handed alpha
Helix 3
AA3
A
68 76Right-handed alpha
Helix 4
AA4
A
113 117Right-handed 310
Helix 5
AA5
A
119 126Right-handed alpha
Helix 6
AA6
A
126 136Right-handed alpha
Helix 7
AA7
A
148 161Right-handed alpha
Helix 8
AA8
A
176 179Right-handed 310
Helix 9
AA9
A
180 192Right-handed alpha
Helix 10
AB1
A
194 201Right-handed 310
Helix 11
AB2
A
202 210Right-handed alpha
Helix 12
AB3
A
232 242Right-handed alpha
Helix 13
AB4
A
258 278Right-handed alpha
Helix 14
AB5
B
37 41Right-handed 310
Helix 15
AB6
B
59 66Right-handed alpha
Helix 16
AB7
B
68 76Right-handed alpha
Helix 17
AB8
B
113 117Right-handed 310
Helix 18
AB9
B
119 126Right-handed alpha
Helix 19
AC1
B
126 134Right-handed alpha
Helix 20
AC2
B
148 161Right-handed alpha
Helix 21
AC3
B
176 179Right-handed 310
Helix 22
AC4
B
180 192Right-handed alpha
Helix 23
AC5
B
195 201Right-handed 310
Helix 24
AC6
B
202 209Right-handed alpha
Helix 25
AC7
B
232 244Right-handed alpha
Helix 26
AC8
B
258 278Right-handed alpha
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There are 3 sheets in PDB entry 6JZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 11first strand
Strand 2
A
14 23anti-parallel
Strand 3
A
28 36anti-parallel
Strand 4
A
78 82anti-parallel
Strand 5
A
46 52parallel
Strand 6
A
138 147parallel
Strand 7
A
168 171parallel
Strand 8
A
216 221parallel
Strand 9
A
247 252parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 11first strand
Strand 2
B
14 23anti-parallel
Strand 3
B
28 36anti-parallel
Strand 4
B
78 82anti-parallel
Strand 5
B
46 52parallel
Strand 6
B
138 146parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 171first strand
Strand 2
B
216 221parallel
Strand 3
B
247 252parallel
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