Analysis of interatomic Contacts of Structural Units in PDB entry:
6JZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JZU entry

There are 2 chains in PDB entry 6JZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 341
B
 ASP 11LEU 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6JZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
23 28Right-handed alpha
Helix 3
AA3
A
30 37Right-handed alpha
Helix 4
AA4
A
66 71Right-handed alpha
Helix 5
AA5
A
73 91Right-handed alpha
Helix 6
AA6
A
100 109Right-handed alpha
Helix 7
AA7
A
110 114Right-handed 310
Helix 8
AA8
A
123 125Right-handed 310
Helix 9
AA9
A
130 150Right-handed alpha
Helix 10
AB1
A
152 155Right-handed 310
Helix 11
AB2
A
165 178Right-handed alpha
Helix 12
AB3
A
190 202Right-handed alpha
Helix 13
AB4
A
208 213Right-handed alpha
Helix 14
AB5
A
214 216Right-handed 310
Helix 15
AB6
A
232 236Right-handed 310
Helix 16
AB7
A
277 282Right-handed alpha
Helix 17
AB8
A
293 305Right-handed alpha
Helix 18
AB9
A
318 332Right-handed alpha
Helix 19
AC1
B
15 46Right-handed alpha
Helix 20
AC2
B
49 74Right-handed alpha
Helix 21
AC3
B
79 87Right-handed alpha
Helix 22
AC4
B
87 100Right-handed alpha
Helix 23
AC5
B
102 111Right-handed alpha
Helix 24
AC6
B
112 126Right-handed alpha
Helix 25
AC7
B
127 129Right-handed 310
Helix 26
AC8
B
130 158Right-handed alpha
Helix 27
AC9
B
158 184Right-handed alpha
Helix 28
AD1
B
184 191Right-handed alpha
Helix 29
AD2
B
194 214Right-handed alpha
Helix 30
AD3
B
216 225Right-handed alpha
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There are 4 sheets in PDB entry 6JZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 48first strand
Strand 2
A
54 61anti-parallel
Strand 3
A
2 6parallel
Strand 4
A
95 98parallel
Strand 5
A
127 128parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
120 121anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
A
183 187parallel
Strand 3
A
157 161parallel
Strand 4
A
218 221parallel
Strand 5
A
240 244parallel
Strand 6
A
260 264parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 292first strand
Strand 2
A
267 270anti-parallel
Strand 3
A
334 336anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il