Analysis of interatomic Contacts of Structural Units in PDB entry:
6K02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K02 entry

There are 2 chains in PDB entry 6K02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3SER 294
B
 LEU 4ASP 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6K02. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 13Right-handed 310
Helix 2
AA2
A
15 21Right-handed alpha
Helix 3
AA3
A
23 74Right-handed alpha
Helix 4
AA4
A
80 85Right-handed alpha
Helix 5
AA5
A
93 102Right-handed alpha
Helix 6
AA6
A
115 124Right-handed alpha
Helix 7
AA7
A
124 131Right-handed alpha
Helix 8
AA8
A
132 134Right-handed 310
Helix 9
AA9
A
135 140Right-handed alpha
Helix 10
AB1
A
187 191Right-handed 310
Helix 11
AB2
A
239 245Right-handed 310
Helix 12
AB3
A
261 279Right-handed alpha
Helix 13
AB4
A
283 289Right-handed alpha
Helix 14
AB5
B
9 13Right-handed 310
Helix 15
AB6
B
15 21Right-handed alpha
Helix 16
AB7
B
23 74Right-handed alpha
Helix 17
AB8
B
80 85Right-handed alpha
Helix 18
AB9
B
93 102Right-handed alpha
Helix 19
AC1
B
115 124Right-handed alpha
Helix 20
AC2
B
124 131Right-handed alpha
Helix 21
AC3
B
132 134Right-handed 310
Helix 22
AC4
B
135 140Right-handed alpha
Helix 23
AC5
B
187 191Right-handed 310
Helix 24
AC6
B
239 245Right-handed 310
Helix 25
AC7
B
259 279Right-handed alpha
Helix 26
AC8
B
283 289Right-handed alpha
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There are 4 sheets in PDB entry 6K02. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 150first strand
Strand 2
A
155 162anti-parallel
Strand 3
A
172 180anti-parallel
Strand 4
A
195 200anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
235 236anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 150first strand
Strand 2
B
155 162anti-parallel
Strand 3
B
172 180anti-parallel
Strand 4
B
195 200anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 217first strand
Strand 2
B
233 236anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il