Analysis of interatomic Contacts of Structural Units in PDB entry:
6K0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K0K entry

There are 4 chains in PDB entry 6K0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLU 480
B
 ARG 3GLU 480
C
 SER 2GLY 483
D
 SER 2GLY 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 6K0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 20Right-handed alpha
Helix 2
AA2
A
22 31Right-handed alpha
Helix 3
AA3
A
43 62Right-handed alpha
Helix 4
AA4
A
116 121Right-handed alpha
Helix 5
AA5
A
175 189Right-handed alpha
Helix 6
AA6
A
200 214Right-handed alpha
Helix 7
AA7
A
226 230Right-handed 310
Helix 8
AA8
A
232 242Right-handed alpha
Helix 9
AA9
A
250 257Right-handed alpha
Helix 10
AB1
A
258 276Right-handed alpha
Helix 11
AB2
A
287 292Right-handed 310
Helix 12
AB3
A
297 311Right-handed alpha
Helix 13
AB4
A
318 323Right-handed alpha
Helix 14
AB5
A
326 343Right-handed alpha
Helix 15
AB6
A
344 349Right-handed 310
Helix 16
AB7
A
360 376Right-handed alpha
Helix 17
AB8
A
389 397Right-handed alpha
Helix 18
AB9
A
410 418Right-handed alpha
Helix 19
AC1
A
433 449Right-handed alpha
Helix 20
AC2
B
15 20Right-handed alpha
Helix 21
AC3
B
22 31Right-handed alpha
Helix 22
AC4
B
43 62Right-handed alpha
Helix 23
AC5
B
175 189Right-handed alpha
Helix 24
AC6
B
200 214Right-handed alpha
Helix 25
AC7
B
226 230Right-handed 310
Helix 26
AC8
B
232 242Right-handed alpha
Helix 27
AC9
B
250 258Right-handed alpha
Helix 28
AD1
B
258 276Right-handed alpha
Helix 29
AD2
B
287 292Right-handed 310
Helix 30
AD3
B
297 311Right-handed alpha
Helix 31
AD4
B
318 323Right-handed alpha
Helix 32
AD5
B
326 343Right-handed alpha
Helix 33
AD6
B
344 349Right-handed 310
Helix 34
AD7
B
360 376Right-handed alpha
Helix 35
AD8
B
389 397Right-handed alpha
Helix 36
AD9
B
410 418Right-handed alpha
Helix 37
AE1
B
433 448Right-handed alpha
Helix 38
AE2
C
15 20Right-handed alpha
Helix 39
AE3
C
22 30Right-handed alpha
Helix 40
AE4
C
43 62Right-handed alpha
Helix 41
AE5
C
175 189Right-handed alpha
Helix 42
AE6
C
200 214Right-handed alpha
Helix 43
AE7
C
226 231Right-handed alpha
Helix 44
AE8
C
232 242Right-handed alpha
Helix 45
AE9
C
251 257Right-handed alpha
Helix 46
AF1
C
258 276Right-handed alpha
Helix 47
AF2
C
287 292Right-handed 310
Helix 48
AF3
C
297 310Right-handed alpha
Helix 49
AF4
C
318 323Right-handed alpha
Helix 50
AF5
C
326 344Right-handed alpha
Helix 51
AF6
C
360 376Right-handed alpha
Helix 52
AF7
C
389 398Right-handed alpha
Helix 53
AF8
C
410 418Right-handed alpha
Helix 54
AF9
C
433 448Right-handed alpha
Helix 55
AG1
D
15 20Right-handed alpha
Helix 56
AG2
D
22 30Right-handed alpha
Helix 57
AG3
D
43 62Right-handed alpha
Helix 58
AG4
D
175 189Right-handed alpha
Helix 59
AG5
D
200 214Right-handed alpha
Helix 60
AG6
D
226 230Right-handed 310
Helix 61
AG7
D
232 243Right-handed alpha
Helix 62
AG8
D
251 257Right-handed alpha
Helix 63
AG9
D
258 276Right-handed alpha
Helix 64
AH1
D
287 292Right-handed 310
Helix 65
AH2
D
297 311Right-handed alpha
Helix 66
AH3
D
318 323Right-handed alpha
Helix 67
AH4
D
326 342Right-handed alpha
Helix 68
AH5
D
360 376Right-handed alpha
Helix 69
AH6
D
389 398Right-handed alpha
Helix 70
AH7
D
410 418Right-handed alpha
Helix 71
AH8
D
433 448Right-handed alpha
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There are 10 sheets in PDB entry 6K0K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
34 38parallel
Strand 3
A
66 70parallel
Strand 4
A
192 195parallel
Strand 5
A
219 224parallel
Strand 6
A
245 249parallel
Strand 7
A
279 283parallel
Strand 8
A
314 317parallel
Strand 9
A
9 13parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 111first strand
Strand 2
A
93 97parallel
Strand 3
A
145 149anti-parallel
Strand 4
A
134 142anti-parallel
Strand 5
A
126 129anti-parallel
Strand 6
A
162 164anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 427first strand
Strand 2
A
404 408parallel
Strand 3
A
379 385parallel
Strand 4
A
456 461parallel
Strand 5
A
473 478anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
34 38parallel
Strand 3
B
66 70parallel
Strand 4
B
192 195parallel
Strand 5
B
219 224parallel
Strand 6
B
245 249parallel
Strand 7
B
279 283parallel
Strand 8
B
314 317parallel
Strand 9
B
9 13parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 97first strand
Strand 2
B
145 149anti-parallel
Strand 3
B
134 142anti-parallel
Strand 4
B
126 129anti-parallel
Strand 5
B
162 164anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
423 427first strand
Strand 2
B
404 408parallel
Strand 3
B
379 385parallel
Strand 4
B
456 461parallel
Strand 5
B
473 478anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 13first strand
Strand 2
C
34 38parallel
Strand 3
C
66 70parallel
Strand 4
C
192 195parallel
Strand 5
C
219 224parallel
Strand 6
C
245 248parallel
Strand 7
C
279 282parallel
Strand 8
C
314 317parallel
Strand 9
C
9 13parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
423 427first strand
Strand 2
C
404 408parallel
Strand 3
C
379 385parallel
Strand 4
C
456 460parallel
Strand 5
C
474 478anti-parallel
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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 13first strand
Strand 2
D
34 38parallel
Strand 3
D
66 70parallel
Strand 4
D
192 195parallel
Strand 5
D
219 224parallel
Strand 6
D
245 248parallel
Strand 7
D
279 282parallel
Strand 8
D
314 317parallel
Strand 9
D
9 13parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
423 427first strand
Strand 2
D
404 408parallel
Strand 3
D
379 385parallel
Strand 4
D
456 461parallel
Strand 5
D
473 478anti-parallel
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