Analysis of interatomic Contacts of Structural Units in PDB entry:
6K0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K0R entry

There are 12 chains in PDB entry 6K0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 5GLN 451
B
GLU 5GLN 451
C
LYS 7GLN 451
D
HIS 25PHE 450
E
GLY 23ALA 449
F
GLY 23PHE 452
G
VAL 6GLN 451
H
GLU 5GLN 451
I
SER 8GLN 451
J
ILE 22PHE 452
K
ILE 22TYR 446
L
GLY 23ASP 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are173 helices in PDB entry 6K0R. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
12 19Right-handed 310
Helix 2
AA2
A
42 58Right-handed alpha
Helix 3
AA3
A
75 88Right-handed alpha
Helix 4
AA4
A
99 102Right-handed 310
Helix 5
AA5
A
107 119Right-handed alpha
Helix 6
AA6
A
240 247Right-handed alpha
Helix 7
AA7
A
272 290Right-handed alpha
Helix 8
AA8
A
304 307Right-handed 310
Helix 9
AA9
A
308 320Right-handed alpha
Helix 10
AB1
A
351 356Right-handed alpha
Helix 11
AB2
A
367 383Right-handed alpha
Helix 12
AB3
A
387 401Right-handed alpha
Helix 13
AB4
A
402 420Right-handed alpha
Helix 14
AB5
A
426 437Right-handed alpha
Helix 15
AB6
A
439 451Right-handed alpha
Helix 16
AB7
B
15 19Right-handed 310
Helix 17
AB8
B
42 59Right-handed alpha
Helix 18
AB9
B
75 88Right-handed alpha
Helix 19
AC1
B
107 119Right-handed alpha
Helix 20
AC2
B
240 247Right-handed alpha
Helix 21
AC3
B
272 290Right-handed alpha
Helix 22
AC4
B
303 307Right-handed 310
Helix 23
AC5
B
308 320Right-handed alpha
Helix 24
AC6
B
351 356Right-handed alpha
Helix 25
AC7
B
367 383Right-handed alpha
Helix 26
AC8
B
387 401Right-handed alpha
Helix 27
AC9
B
402 408Right-handed alpha
Helix 28
AD1
B
409 421Right-handed alpha
Helix 29
AD2
B
426 436Right-handed alpha
Helix 30
AD3
B
439 451Right-handed alpha
Helix 31
AD4
C
11 16Right-handed 310
Helix 32
AD5
C
42 58Right-handed alpha
Helix 33
AD6
C
75 88Right-handed alpha
Helix 34
AD7
C
99 102Right-handed 310
Helix 35
AD8
C
107 118Right-handed alpha
Helix 36
AD9
C
240 249Right-handed alpha
Helix 37
AE1
C
272 289Right-handed alpha
Helix 38
AE2
C
304 307Right-handed 310
Helix 39
AE3
C
308 320Right-handed alpha
Helix 40
AE4
C
351 356Right-handed alpha
Helix 41
AE5
C
367 383Right-handed alpha
Helix 42
AE6
C
387 401Right-handed alpha
Helix 43
AE7
C
402 409Right-handed alpha
Helix 44
AE8
C
409 420Right-handed alpha
Helix 45
AE9
C
426 437Right-handed alpha
Helix 46
AF1
C
439 450Right-handed alpha
Helix 47
AF2
D
49 65Right-handed alpha
Helix 48
AF3
D
82 93Right-handed alpha
Helix 49
AF4
D
106 108Right-handed 310
Helix 50
AF5
D
116 126Right-handed alpha
Helix 51
AF6
D
244 251Right-handed alpha
Helix 52
AF7
D
269 287Right-handed alpha
Helix 53
AF8
D
305 317Right-handed alpha
Helix 54
AF9
D
347 352Right-handed alpha
Helix 55
AG1
D
363 376Right-handed alpha
Helix 56
AG2
D
383 397Right-handed alpha
Helix 57
AG3
D
398 416Right-handed alpha
Helix 58
AG4
D
423 433Right-handed alpha
Helix 59
AG5
D
435 450Right-handed alpha
Helix 60
AG6
E
49 65Right-handed alpha
Helix 61
AG7
E
82 94Right-handed alpha
Helix 62
AG8
E
106 109Right-handed 310
Helix 63
AG9
E
114 126Right-handed alpha
Helix 64
AH1
E
244 251Right-handed alpha
Helix 65
AH2
E
269 287Right-handed alpha
Helix 66
AH3
E
301 304Right-handed 310
Helix 67
AH4
E
305 317Right-handed alpha
Helix 68
AH5
E
347 352Right-handed alpha
Helix 69
AH6
E
363 378Right-handed alpha
Helix 70
AH7
E
383 397Right-handed alpha
Helix 71
AH8
E
398 416Right-handed alpha
Helix 72
AH9
E
422 433Right-handed alpha
Helix 73
AI1
E
435 448Right-handed alpha
Helix 74
AI2
F
49 66Right-handed alpha
Helix 75
AI3
F
82 95Right-handed alpha
Helix 76
AI4
F
106 109Right-handed 310
Helix 77
AI5
F
114 126Right-handed alpha
Helix 78
AI6
F
244 254Right-handed alpha
Helix 79
AI7
F
269 286Right-handed alpha
Helix 80
AI8
F
300 304Right-handed 310
Helix 81
AI9
F
305 316Right-handed alpha
Helix 82
AJ1
F
347 352Right-handed alpha
Helix 83
AJ2
F
363 378Right-handed alpha
Helix 84
AJ3
F
383 397Right-handed alpha
Helix 85
AJ4
F
398 414Right-handed alpha
Helix 86
AJ5
F
422 433Right-handed alpha
Helix 87
AJ6
F
435 450Right-handed alpha
Helix 88
AJ7
G
14 19Right-handed 310
Helix 89
AJ8
G
42 58Right-handed alpha
Helix 90
AJ9
G
75 87Right-handed alpha
Helix 91
AK1
G
99 102Right-handed 310
Helix 92
AK2
G
107 119Right-handed alpha
Helix 93
AK3
G
241 248Right-handed alpha
Helix 94
AK4
G
272 290Right-handed alpha
Helix 95
AK5
G
303 307Right-handed 310
Helix 96
AK6
G
308 320Right-handed alpha
Helix 97
AK7
G
367 383Right-handed alpha
Helix 98
AK8
G
387 401Right-handed alpha
Helix 99
AK9
G
402 421Right-handed alpha
Helix 100
AL1
G
426 436Right-handed alpha
Helix 101
AL2
G
439 451Right-handed alpha
Helix 102
AL3
H
42 57Right-handed alpha
Helix 103
AL4
H
75 88Right-handed alpha
Helix 104
AL5
H
99 102Right-handed 310
Helix 105
AL6
H
107 119Right-handed alpha
Helix 106
AL7
H
240 247Right-handed alpha
Helix 107
AL8
H
272 289Right-handed alpha
Helix 108
AL9
H
303 307Right-handed 310
Helix 109
AM1
H
310 318Right-handed alpha
Helix 110
AM2
H
351 356Right-handed alpha
Helix 111
AM3
H
367 383Right-handed alpha
Helix 112
AM4
H
387 399Right-handed alpha
Helix 113
AM5
H
402 409Right-handed alpha
Helix 114
AM6
H
409 421Right-handed alpha
Helix 115
AM7
H
426 437Right-handed alpha
Helix 116
AM8
H
439 451Right-handed alpha
Helix 117
AM9
I
11 16Right-handed alpha
Helix 118
AN1
I
17 19Right-handed 310
Helix 119
AN2
I
42 58Right-handed alpha
Helix 120
AN3
I
75 88Right-handed alpha
Helix 121
AN4
I
99 101Right-handed 310
Helix 122
AN5
I
107 119Right-handed alpha
Helix 123
AN6
I
240 249Right-handed alpha
Helix 124
AN7
I
272 290Right-handed alpha
Helix 125
AN8
I
303 307Right-handed 310
Helix 126
AN9
I
308 319Right-handed alpha
Helix 127
AO1
I
354 356Right-handed 310
Helix 128
AO2
I
367 382Right-handed alpha
Helix 129
AO3
I
387 401Right-handed alpha
Helix 130
AO4
I
402 409Right-handed alpha
Helix 131
AO5
I
409 420Right-handed alpha
Helix 132
AO6
I
426 437Right-handed alpha
Helix 133
AO7
I
439 450Right-handed alpha
Helix 134
AO8
J
49 66Right-handed alpha
Helix 135
AO9
J
82 95Right-handed alpha
Helix 136
AP1
J
114 125Right-handed alpha
Helix 137
AP2
J
244 249Right-handed alpha
Helix 138
AP3
J
269 287Right-handed alpha
Helix 139
AP4
J
300 304Right-handed 310
Helix 140
AP5
J
305 317Right-handed alpha
Helix 141
AP6
J
347 352Right-handed alpha
Helix 142
AP7
J
363 377Right-handed alpha
Helix 143
AP8
J
383 397Right-handed alpha
Helix 144
AP9
J
398 415Right-handed alpha
Helix 145
AQ1
J
422 433Right-handed alpha
Helix 146
AQ2
J
435 452Right-handed alpha
Helix 147
AQ3
K
49 66Right-handed alpha
Helix 148
AQ4
K
82 95Right-handed alpha
Helix 149
AQ5
K
106 109Right-handed 310
Helix 150
AQ6
K
114 125Right-handed alpha
Helix 151
AQ7
K
244 251Right-handed alpha
Helix 152
AQ8
K
269 287Right-handed alpha
Helix 153
AQ9
K
300 304Right-handed 310
Helix 154
AR1
K
305 317Right-handed alpha
Helix 155
AR2
K
347 352Right-handed alpha
Helix 156
AR3
K
363 378Right-handed alpha
Helix 157
AR4
K
383 397Right-handed alpha
Helix 158
AR5
K
398 415Right-handed alpha
Helix 159
AR6
K
422 433Right-handed alpha
Helix 160
AR7
K
435 445Right-handed alpha
Helix 161
AR8
L
49 66Right-handed alpha
Helix 162
AR9
L
82 95Right-handed alpha
Helix 163
AS1
L
114 125Right-handed alpha
Helix 164
AS2
L
245 251Right-handed alpha
Helix 165
AS3
L
269 287Right-handed alpha
Helix 166
AS4
L
301 304Right-handed 310
Helix 167
AS5
L
305 317Right-handed alpha
Helix 168
AS6
L
347 352Right-handed alpha
Helix 169
AS7
L
363 378Right-handed alpha
Helix 170
AS8
L
383 397Right-handed alpha
Helix 171
AS9
L
398 416Right-handed alpha
Helix 172
AT1
L
422 433Right-handed alpha
Helix 173
AT2
L
435 445Right-handed alpha
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There are 45 sheets in PDB entry 6K0R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
35 36first strand
Strand 2
A
39 40anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
93 97first strand
Strand 2
A
298 302parallel
Strand 3
A
326 331parallel
Strand 4
A
65 69parallel
Strand 5
A
358 362parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
237 239first strand
Strand 2
A
120 123anti-parallel
Strand 3
A
294 296anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
335 337first strand
Strand 2
A
345 347anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
35 36first strand
Strand 2
B
39 40anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
93 97first strand
Strand 2
B
298 302parallel
Strand 3
B
326 331parallel
Strand 4
B
65 69parallel
Strand 5
B
358 362parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
238 239first strand
Strand 2
B
120 123anti-parallel
Strand 3
B
293 296anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
335 337first strand
Strand 2
B
345 347anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
437 438first strand
Strand 2
D
354 358anti-parallel
Strand 3
D
72 76parallel
Strand 4
D
323 328parallel
Strand 5
D
295 299parallel
Strand 6
D
100 104parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
35 36first strand
Strand 2
C
39 40anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
93 97first strand
Strand 2
C
298 302parallel
Strand 3
C
326 331parallel
Strand 4
C
65 69parallel
Strand 5
C
358 362parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
237 239first strand
Strand 2
C
120 123anti-parallel
Strand 3
C
293 296anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
335 337first strand
Strand 2
C
345 347anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
385 386first strand
Strand 2
C
424 425parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
42 43first strand
Strand 2
D
46 47anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
242 243first strand
Strand 2
D
127 130anti-parallel
Strand 3
D
290 293anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
332 334first strand
Strand 2
D
341 343anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
100 104first strand
Strand 2
E
295 299parallel
Strand 3
E
323 328parallel
Strand 4
E
72 77parallel
Strand 5
E
354 359parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
242 243first strand
Strand 2
E
127 130anti-parallel
Strand 3
E
290 293anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
332 334first strand
Strand 2
E
341 343anti-parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
100 104first strand
Strand 2
F
295 299parallel
Strand 3
F
323 328parallel
Strand 4
F
72 77parallel
Strand 5
F
354 359parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
242 243first strand
Strand 2
F
127 130anti-parallel
Strand 3
F
290 293anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
332 334first strand
Strand 2
F
341 343anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
35 36first strand
Strand 2
G
39 40anti-parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
93 97first strand
Strand 2
G
298 302parallel
Strand 3
G
326 331parallel
Strand 4
G
66 69parallel
Strand 5
G
359 362parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
238 239first strand
Strand 2
G
120 122anti-parallel
Strand 3
G
294 296anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
335 337first strand
Strand 2
G
345 347anti-parallel
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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
437 438first strand
Strand 2
L
354 358anti-parallel
Strand 3
L
72 76parallel
Strand 4
L
323 328parallel
Strand 5
L
295 299parallel
Strand 6
L
100 104parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
35 36first strand
Strand 2
H
39 40anti-parallel
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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
93 97first strand
Strand 2
H
298 302parallel
Strand 3
H
326 331parallel
Strand 4
H
65 69parallel
Strand 5
H
358 362parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
237 239first strand
Strand 2
H
120 123anti-parallel
Strand 3
H
293 296anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
335 337first strand
Strand 2
H
345 347anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
35 36first strand
Strand 2
I
39 40anti-parallel
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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
93 97first strand
Strand 2
I
298 302parallel
Strand 3
I
326 331parallel
Strand 4
I
65 69parallel
Strand 5
I
358 362parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
238 239first strand
Strand 2
I
120 123anti-parallel
Strand 3
I
293 296anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
335 337first strand
Strand 2
I
345 347anti-parallel
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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
101 104first strand
Strand 2
J
295 299parallel
Strand 3
J
323 328parallel
Strand 4
J
72 76parallel
Strand 5
J
354 358parallel
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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
242 243first strand
Strand 2
J
127 130anti-parallel
Strand 3
J
290 293anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
332 334first strand
Strand 2
J
341 343anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
42 43first strand
Strand 2
K
46 47anti-parallel
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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
100 104first strand
Strand 2
K
295 299parallel
Strand 3
K
323 328parallel
Strand 4
K
72 77parallel
Strand 5
K
354 359parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
242 243first strand
Strand 2
K
127 129anti-parallel
Strand 3
K
291 293anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
332 334first strand
Strand 2
K
341 343anti-parallel
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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
242 243first strand
Strand 2
L
127 129anti-parallel
Strand 3
L
291 293anti-parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
332 334first strand
Strand 2
L
341 343anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il