Analysis of interatomic Contacts of Structural Units in PDB entry:
6K0V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6K0V entry

There are 4 chains in PDB entry 6K0V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 726	TRP 1287
B	GLY 726	TRP 1287
C	GLY 726	TRP 1287
D	GLY 726	TRP 1287

There are 15 helices in PDB entry 6K0V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	763	767	Right-handed 310
Helix 2	AA2	A	830	834	Right-handed 310
Helix 3	AA3	A	909	920	Right-handed alpha
Helix 4	AA4	A	975	978	Right-handed 310
Helix 5	AA5	B	763	767	Right-handed 310
Helix 6	AA6	B	830	834	Right-handed 310
Helix 7	AA7	B	909	920	Right-handed alpha
Helix 8	AA8	B	975	978	Right-handed 310
Helix 9	AA9	C	763	767	Right-handed 310
Helix 10	AB1	C	830	834	Right-handed 310
Helix 11	AB2	C	909	919	Right-handed alpha
Helix 12	AB3	C	975	978	Right-handed 310
Helix 13	AB4	D	763	767	Right-handed 310
Helix 14	AB5	D	830	834	Right-handed 310
Helix 15	AB6	D	909	920	Right-handed alpha

There are 34 sheets in PDB entry 6K0V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	737	first strand
Strand 2	A	879	887	anti-parallel
Strand 3	A	769	771	anti-parallel
Strand 4	A	748	749	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	737	first strand
Strand 2	A	879	887	anti-parallel
Strand 3	A	786	794	anti-parallel
Strand 4	A	851	861	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	744	745	first strand
Strand 2	A	777	781	anti-parallel
Strand 3	A	866	870	anti-parallel
Strand 4	A	800	807	anti-parallel
Strand 5	A	810	818	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	824	826	first strand
Strand 2	A	845	847	anti-parallel

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There are 14 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	901	903	first strand
Strand 2	A	925	928	parallel
Strand 3	A	947	950	parallel
Strand 4	A	981	988	parallel
Strand 5	A	1011	1018	parallel
Strand 6	A	1033	1035	parallel
Strand 7	A	1057	1059	parallel
Strand 8	A	1088	1097	parallel
Strand 9	A	1112	1121	parallel
Strand 10	A	1146	1154	parallel
Strand 11	A	1188	1199	parallel
Strand 12	A	1218	1229	parallel
Strand 13	A	1251	1261	parallel
Strand 14	A	1277	1283	parallel

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There are 13 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	931	934	first strand
Strand 2	A	956	959	parallel
Strand 3	A	981	988	parallel
Strand 4	A	1011	1018	parallel
Strand 5	A	1038	1040	parallel
Strand 6	A	1062	1064	parallel
Strand 7	A	1088	1097	parallel
Strand 8	A	1112	1121	parallel
Strand 9	A	1146	1154	parallel
Strand 10	A	1188	1199	parallel
Strand 11	A	1218	1229	parallel
Strand 12	A	1251	1261	parallel
Strand 13	A	1277	1283	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	938	941	first strand
Strand 2	A	970	973	parallel
Strand 3	A	1000	1005	parallel
Strand 4	A	1022	1027	parallel
Strand 5	A	1047	1050	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1071	1074	first strand
Strand 2	A	1103	1106	parallel
Strand 3	A	1127	1130	parallel
Strand 4	A	1179	1183	parallel
Strand 5	A	1204	1210	parallel
Strand 6	A	1234	1238	parallel
Strand 7	A	1266	1269	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1158	1160	first strand
Strand 2	A	1174	1176	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	734	737	first strand
Strand 2	B	879	887	anti-parallel
Strand 3	B	769	771	anti-parallel
Strand 4	B	748	749	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	734	737	first strand
Strand 2	B	879	887	anti-parallel
Strand 3	B	786	794	anti-parallel
Strand 4	B	851	861	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	744	745	first strand
Strand 2	B	777	781	anti-parallel
Strand 3	B	866	870	anti-parallel
Strand 4	B	800	807	anti-parallel
Strand 5	B	810	818	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	824	826	first strand
Strand 2	B	845	847	anti-parallel

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There are 14 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	901	903	first strand
Strand 2	B	925	928	parallel
Strand 3	B	947	950	parallel
Strand 4	B	981	988	parallel
Strand 5	B	1011	1018	parallel
Strand 6	B	1033	1035	parallel
Strand 7	B	1057	1059	parallel
Strand 8	B	1088	1097	parallel
Strand 9	B	1112	1121	parallel
Strand 10	B	1146	1154	parallel
Strand 11	B	1189	1199	parallel
Strand 12	B	1219	1229	parallel
Strand 13	B	1251	1261	parallel
Strand 14	B	1277	1283	parallel

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There are 13 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	931	934	first strand
Strand 2	B	956	959	parallel
Strand 3	B	981	988	parallel
Strand 4	B	1011	1018	parallel
Strand 5	B	1038	1040	parallel
Strand 6	B	1062	1064	parallel
Strand 7	B	1088	1097	parallel
Strand 8	B	1112	1121	parallel
Strand 9	B	1146	1154	parallel
Strand 10	B	1189	1199	parallel
Strand 11	B	1219	1229	parallel
Strand 12	B	1251	1261	parallel
Strand 13	B	1277	1283	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	938	941	first strand
Strand 2	B	970	973	parallel
Strand 3	B	1000	1005	parallel
Strand 4	B	1022	1027	parallel
Strand 5	B	1047	1050	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1071	1074	first strand
Strand 2	B	1103	1106	parallel
Strand 3	B	1127	1130	parallel
Strand 4	B	1179	1183	parallel
Strand 5	B	1204	1210	parallel
Strand 6	B	1234	1238	parallel
Strand 7	B	1266	1269	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1123	1124	first strand
Strand 2	B	1157	1160	anti-parallel
Strand 3	B	1174	1176	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	737	first strand
Strand 2	C	879	887	anti-parallel
Strand 3	C	769	771	anti-parallel
Strand 4	C	748	749	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	737	first strand
Strand 2	C	879	887	anti-parallel
Strand 3	C	786	794	anti-parallel
Strand 4	C	851	861	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	744	745	first strand
Strand 2	C	777	781	anti-parallel
Strand 3	C	866	870	anti-parallel
Strand 4	C	800	807	anti-parallel
Strand 5	C	810	818	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	824	826	first strand
Strand 2	C	845	847	anti-parallel

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There are 14 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	901	903	first strand
Strand 2	C	925	928	parallel
Strand 3	C	947	950	parallel
Strand 4	C	981	988	parallel
Strand 5	C	1011	1018	parallel
Strand 6	C	1033	1035	parallel
Strand 7	C	1057	1064	parallel
Strand 8	C	1088	1095	parallel
Strand 9	C	1112	1119	parallel
Strand 10	C	1146	1154	parallel
Strand 11	C	1189	1199	parallel
Strand 12	C	1219	1229	parallel
Strand 13	C	1251	1261	parallel
Strand 14	C	1277	1283	parallel

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There are 13 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	931	934	first strand
Strand 2	C	956	959	parallel
Strand 3	C	981	988	parallel
Strand 4	C	1011	1018	parallel
Strand 5	C	1038	1040	parallel
Strand 6	C	1057	1064	parallel
Strand 7	C	1088	1095	parallel
Strand 8	C	1112	1119	parallel
Strand 9	C	1146	1154	parallel
Strand 10	C	1189	1199	parallel
Strand 11	C	1219	1229	parallel
Strand 12	C	1251	1261	parallel
Strand 13	C	1277	1283	parallel

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There are 12 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	938	941	first strand
Strand 2	C	970	973	parallel
Strand 3	C	1000	1005	parallel
Strand 4	C	1022	1027	parallel
Strand 5	C	1047	1050	parallel
Strand 6	C	1071	1074	parallel
Strand 7	C	1103	1106	parallel
Strand 8	C	1127	1130	parallel
Strand 9	C	1179	1183	parallel
Strand 10	C	1204	1210	parallel
Strand 11	C	1234	1238	parallel
Strand 12	C	1266	1269	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1158	1160	first strand
Strand 2	C	1174	1176	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	734	737	first strand
Strand 2	D	879	887	anti-parallel
Strand 3	D	769	771	anti-parallel
Strand 4	D	748	749	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	734	737	first strand
Strand 2	D	879	887	anti-parallel
Strand 3	D	786	794	anti-parallel
Strand 4	D	851	861	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	744	745	first strand
Strand 2	D	777	781	anti-parallel
Strand 3	D	866	870	anti-parallel
Strand 4	D	800	807	anti-parallel
Strand 5	D	810	818	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	824	826	first strand
Strand 2	D	845	847	anti-parallel

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There are 14 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	901	903	first strand
Strand 2	D	925	928	parallel
Strand 3	D	947	950	parallel
Strand 4	D	981	988	parallel
Strand 5	D	1011	1018	parallel
Strand 6	D	1033	1035	parallel
Strand 7	D	1057	1064	parallel
Strand 8	D	1088	1097	parallel
Strand 9	D	1111	1121	parallel
Strand 10	D	1146	1154	parallel
Strand 11	D	1189	1199	parallel
Strand 12	D	1219	1229	parallel
Strand 13	D	1251	1261	parallel
Strand 14	D	1277	1283	parallel

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There are 13 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	931	934	first strand
Strand 2	D	956	959	parallel
Strand 3	D	981	988	parallel
Strand 4	D	1011	1018	parallel
Strand 5	D	1038	1040	parallel
Strand 6	D	1057	1064	parallel
Strand 7	D	1088	1097	parallel
Strand 8	D	1111	1121	parallel
Strand 9	D	1146	1154	parallel
Strand 10	D	1189	1199	parallel
Strand 11	D	1219	1229	parallel
Strand 12	D	1251	1261	parallel
Strand 13	D	1277	1283	parallel

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There are 12 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	938	941	first strand
Strand 2	D	970	973	parallel
Strand 3	D	1000	1005	parallel
Strand 4	D	1022	1027	parallel
Strand 5	D	1047	1050	parallel
Strand 6	D	1071	1074	parallel
Strand 7	D	1103	1106	parallel
Strand 8	D	1127	1130	parallel
Strand 9	D	1179	1183	parallel
Strand 10	D	1206	1210	parallel
Strand 11	D	1234	1238	parallel
Strand 12	D	1266	1269	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1158	1160	first strand
Strand 2	D	1174	1176	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6K0V

Analysis of interatomic Contacts of Structural Units in PDB entry:
6K0V