Analysis of interatomic Contacts of Structural Units in PDB entry:
6K15

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6K15 entry

There are 13 chains in PDB entry 6K15 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	THR 317	TYR 434
H	ASN 57	LEU 486
D	GLU 67	LEU 486
M	PHE 29	THR 578
I	THR 3	LEU 483
G	ASN 5	LEU 383
A	LYS 9	ARG 491
J	LEU 2	VAL 297
E	TYR 16	LYS 73
C	ALA 194	LEU 226
K	PRO 155	THR 196
X	LEU 364	PRO 625
L	ILE 741	ARG 883

There are109 helices in PDB entry 6K15. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	319	343	Right-handed alpha
Helix 2	AA2	F	362	364	Right-handed 310
Helix 3	AA3	F	416	430	Right-handed alpha
Helix 4	AA4	H	58	71	Right-handed alpha
Helix 5	AA5	H	85	87	Right-handed 310
Helix 6	AA6	H	95	102	Right-handed alpha
Helix 7	AA7	H	103	106	Right-handed 310
Helix 8	AA8	H	114	131	Right-handed alpha
Helix 9	AA9	H	138	144	Right-handed alpha
Helix 10	AB1	H	149	163	Right-handed alpha
Helix 11	AB2	H	171	175	Right-handed 310
Helix 12	AB3	H	237	242	Right-handed alpha
Helix 13	AB4	H	247	251	Right-handed 310
Helix 14	AB5	H	283	289	Right-handed alpha
Helix 15	AB6	H	316	331	Right-handed alpha
Helix 16	AB7	H	333	342	Right-handed alpha
Helix 17	AB8	H	346	356	Right-handed alpha
Helix 18	AB9	H	360	368	Right-handed alpha
Helix 19	AC1	H	388	401	Right-handed alpha
Helix 20	AC2	H	403	405	Right-handed 310
Helix 21	AC3	H	406	483	Right-handed alpha
Helix 22	AC4	D	68	76	Right-handed alpha
Helix 23	AC5	D	83	87	Right-handed 310
Helix 24	AC6	D	95	102	Right-handed alpha
Helix 25	AC7	D	103	106	Right-handed 310
Helix 26	AC8	D	114	131	Right-handed alpha
Helix 27	AC9	D	138	144	Right-handed alpha
Helix 28	AD1	D	149	163	Right-handed alpha
Helix 29	AD2	D	316	331	Right-handed alpha
Helix 30	AD3	D	335	341	Right-handed alpha
Helix 31	AD4	D	346	355	Right-handed alpha
Helix 32	AD5	D	360	368	Right-handed alpha
Helix 33	AD6	D	389	399	Right-handed alpha
Helix 34	AD7	D	416	424	Right-handed alpha
Helix 35	AD8	D	424	483	Right-handed alpha
Helix 36	AD9	M	40	47	Right-handed alpha
Helix 37	AE1	M	66	70	Right-handed 310
Helix 38	AE2	M	80	91	Right-handed alpha
Helix 39	AE3	M	93	111	Right-handed alpha
Helix 40	AE4	M	112	116	Right-handed 310
Helix 41	AE5	M	123	132	Right-handed alpha
Helix 42	AE6	M	133	141	Right-handed alpha
Helix 43	AE7	M	150	168	Right-handed alpha
Helix 44	AE8	M	175	181	Right-handed alpha
Helix 45	AE9	M	183	201	Right-handed alpha
Helix 46	AF1	M	208	210	Right-handed 310
Helix 47	AF2	M	211	230	Right-handed alpha
Helix 48	AF3	M	231	233	Right-handed 310
Helix 49	AF4	M	240	250	Right-handed alpha
Helix 50	AF5	M	255	270	Right-handed alpha
Helix 51	AF6	M	278	282	Right-handed 310
Helix 52	AF7	M	288	293	Right-handed alpha
Helix 53	AF8	M	294	298	Right-handed 310
Helix 54	AF9	M	302	317	Right-handed alpha
Helix 55	AG1	M	322	327	Right-handed alpha
Helix 56	AG2	M	331	340	Right-handed alpha
Helix 57	AG3	M	353	358	Right-handed alpha
Helix 58	AG4	M	524	538	Right-handed alpha
Helix 59	AG5	M	545	551	Right-handed alpha
Helix 60	AG6	M	553	562	Right-handed alpha
Helix 61	AG7	M	565	570	Right-handed alpha
Helix 62	AG8	M	572	578	Right-handed alpha
Helix 63	AG9	I	29	54	Right-handed alpha
Helix 64	AH1	I	235	243	Right-handed alpha
Helix 65	AH2	I	249	263	Right-handed alpha
Helix 66	AH3	I	316	324	Right-handed alpha
Helix 67	AH4	I	331	342	Right-handed alpha
Helix 68	AH5	I	394	425	Right-handed alpha
Helix 69	AH6	I	426	445	Right-handed alpha
Helix 70	AH7	I	473	478	Right-handed alpha
Helix 71	AH8	G	16	21	Right-handed alpha
Helix 72	AH9	G	161	168	Right-handed 310
Helix 73	AI1	G	171	177	Right-handed alpha
Helix 74	AI2	G	231	243	Right-handed alpha
Helix 75	AI3	G	249	264	Right-handed alpha
Helix 76	AI4	G	306	319	Right-handed alpha
Helix 77	AI5	G	323	345	Right-handed alpha
Helix 78	AI6	A	11	24	Right-handed alpha
Helix 79	AI7	A	48	58	Right-handed alpha
Helix 80	AI8	A	75	82	Right-handed alpha
Helix 81	AI9	A	89	110	Right-handed alpha
Helix 82	AJ1	A	114	133	Right-handed alpha
Helix 83	AJ2	A	170	180	Right-handed alpha
Helix 84	AJ3	A	302	312	Right-handed alpha
Helix 85	AJ4	A	390	395	Right-handed alpha
Helix 86	AJ5	A	406	412	Right-handed alpha
Helix 87	AJ6	A	416	435	Right-handed alpha
Helix 88	AJ7	A	445	463	Right-handed alpha
Helix 89	AJ8	J	3	14	Right-handed alpha
Helix 90	AJ9	J	20	24	Right-handed 310
Helix 91	AK1	J	56	66	Right-handed alpha
Helix 92	AK2	J	75	101	Right-handed alpha
Helix 93	AK3	J	111	127	Right-handed alpha
Helix 94	AK4	J	189	197	Right-handed alpha
Helix 95	AK5	J	198	207	Right-handed alpha
Helix 96	AK6	J	239	248	Right-handed alpha
Helix 97	AK7	J	250	266	Right-handed alpha
Helix 98	AK8	J	279	290	Right-handed alpha
Helix 99	AK9	E	20	37	Right-handed alpha
Helix 100	AL1	E	45	54	Right-handed alpha
Helix 101	AL2	E	54	72	Right-handed alpha
Helix 102	AL3	C	204	226	Right-handed alpha
Helix 103	AL4	K	173	176	Right-handed 310
Helix 104	AL5	K	177	194	Right-handed alpha
Helix 105	AL6	X	365	369	Right-handed 310
Helix 106	AL7	X	381	390	Right-handed alpha
Helix 107	AL8	X	489	491	Right-handed 310
Helix 108	AL9	L	863	867	Right-handed 310
Helix 109	AM1	L	871	883	Right-handed alpha

There are 16 sheets in PDB entry 6K15. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	359	360	first strand
Strand 2	D	179	180	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	186	190	first strand
Strand 2	F	384	389	parallel
Strand 3	H	234	235	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	80	83	first strand
Strand 2	D	189	192	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	270	274	first strand
Strand 2	H	301	305	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	35	36	first strand
Strand 2	L	748	750	anti-parallel
Strand 3	L	791	792	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	8	9	first strand
Strand 2	A	280	283	anti-parallel
Strand 3	A	294	295	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	219	222	first strand
Strand 2	I	349	352	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	233	234	first strand
Strand 2	I	343	344	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	203	212	first strand
Strand 2	G	215	224	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	279	285	first strand
Strand 2	G	292	298	anti-parallel
Strand 3	G	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	X	435	436	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	196	first strand
Strand 2	A	227	231	anti-parallel
Strand 3	X	497	502	parallel
Strand 4	X	614	623	parallel
Strand 5	X	603	607	anti-parallel
Strand 6	X	523	527	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	479	first strand
Strand 2	J	213	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	200	first strand
Strand 2	K	158	160	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	443	444	first strand
Strand 2	X	483	487	anti-parallel
Strand 3	X	375	377	anti-parallel
Strand 4	X	512	514	anti-parallel
Strand 5	X	588	589	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	508	510	first strand
Strand 2	X	592	594	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6K15

Analysis of interatomic Contacts of Structural Units in PDB entry:
6K15