Analysis of interatomic Contacts of Structural Units in PDB entry:
6K2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K2C entry

There is 1 chain in PDB entry 6K2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 691ALA 1078
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6K2C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
694 713Right-handed alpha
Helix 2
AA2
A
728 730Right-handed 310
Helix 3
AA3
A
731 740Right-handed alpha
Helix 4
AA4
A
769 785Right-handed alpha
Helix 5
AA5
A
786 790Right-handed 310
Helix 6
AA6
A
805 811Right-handed alpha
Helix 7
AA7
A
813 831Right-handed alpha
Helix 8
AA8
A
840 849Right-handed alpha
Helix 9
AA9
A
932 945Right-handed alpha
Helix 10
AB1
A
948 953Right-handed alpha
Helix 11
AB2
A
956 966Right-handed alpha
Helix 12
AB3
A
972 979Right-handed alpha
Helix 13
AB4
A
990 1002Right-handed alpha
Helix 14
AB5
A
1004 1017Right-handed alpha
Helix 15
AB6
A
1025 1029Right-handed 310
Helix 16
AB7
A
1050 1052Right-handed 310
Helix 17
AB8
A
1062 1078Right-handed alpha
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There are 3 sheets in PDB entry 6K2C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
723 727first strand
Strand 2
A
752 756parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
792 794first strand
Strand 2
A
800 802anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
981 983first strand
Strand 2
A
1034 1037parallel
Strand 3
A
1054 1057parallel
Strand 4
A
1047 1049anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il