Analysis of interatomic Contacts of Structural Units in PDB entry:
6K2Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K2Z entry

There are 2 chains in PDB entry 6K2Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ASP 142
B
 SER 5ASP 142
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6K2Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 124Right-handed 310
Helix 2
AA2
B
120 124Right-handed 310
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There are 6 sheets in PDB entry 6K2Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
126 131anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
53 60anti-parallel
Strand 5
B
63 71anti-parallel
Strand 6
B
74 75anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
126 131anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
53 60anti-parallel
Strand 5
B
63 71anti-parallel
Strand 6
B
79 83anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 116first strand
Strand 2
A
102 107anti-parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
22 29anti-parallel
Strand 5
A
133 141anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
63 71anti-parallel
Strand 3
A
79 83anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
63 71anti-parallel
Strand 3
B
53 60anti-parallel
Strand 4
B
38 44anti-parallel
Strand 5
B
126 131anti-parallel
Strand 6
B
11 14anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 116first strand
Strand 2
B
102 107anti-parallel
Strand 3
B
92 98anti-parallel
Strand 4
B
22 29anti-parallel
Strand 5
B
133 141anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il