Analysis of interatomic Contacts of Structural Units in PDB entry:
6K34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K34 entry

There are 4 chains in PDB entry 6K34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 8LEU 308
A
 ARG 8LEU 308
C
 ARG 8LEU 308
D
 ARG 8LEU 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6K34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
12 22Right-handed alpha
Helix 2
AA2
B
30 41Right-handed alpha
Helix 3
AA3
B
94 106Right-handed alpha
Helix 4
AA4
B
123 140Right-handed alpha
Helix 5
AA5
B
141 144Right-handed 310
Helix 6
AA6
B
157 173Right-handed alpha
Helix 7
AA7
B
192 198Right-handed alpha
Helix 8
AA8
B
205 218Right-handed alpha
Helix 9
AA9
B
230 234Right-handed 310
Helix 10
AB1
B
253 267Right-handed alpha
Helix 11
AB2
B
282 287Right-handed 310
Helix 12
AB3
B
290 308Right-handed alpha
Helix 13
AB4
A
12 22Right-handed alpha
Helix 14
AB5
A
31 41Right-handed alpha
Helix 15
AB6
A
94 106Right-handed alpha
Helix 16
AB7
A
123 140Right-handed alpha
Helix 17
AB8
A
141 144Right-handed 310
Helix 18
AB9
A
156 173Right-handed alpha
Helix 19
AC1
A
192 198Right-handed alpha
Helix 20
AC2
A
205 217Right-handed alpha
Helix 21
AC3
A
230 234Right-handed 310
Helix 22
AC4
A
253 267Right-handed alpha
Helix 23
AC5
A
282 287Right-handed 310
Helix 24
AC6
A
290 308Right-handed alpha
Helix 25
AC7
C
12 22Right-handed alpha
Helix 26
AC8
C
31 41Right-handed alpha
Helix 27
AC9
C
94 106Right-handed alpha
Helix 28
AD1
C
123 140Right-handed alpha
Helix 29
AD2
C
141 144Right-handed 310
Helix 30
AD3
C
156 173Right-handed alpha
Helix 31
AD4
C
192 198Right-handed alpha
Helix 32
AD5
C
205 218Right-handed alpha
Helix 33
AD6
C
230 234Right-handed 310
Helix 34
AD7
C
253 267Right-handed alpha
Helix 35
AD8
C
282 287Right-handed 310
Helix 36
AD9
C
290 307Right-handed alpha
Helix 37
AE1
D
12 22Right-handed alpha
Helix 38
AE2
D
31 41Right-handed alpha
Helix 39
AE3
D
94 106Right-handed alpha
Helix 40
AE4
D
123 140Right-handed alpha
Helix 41
AE5
D
141 144Right-handed 310
Helix 42
AE6
D
156 172Right-handed alpha
Helix 43
AE7
D
192 198Right-handed alpha
Helix 44
AE8
D
205 218Right-handed alpha
Helix 45
AE9
D
230 234Right-handed 310
Helix 46
AF1
D
253 267Right-handed alpha
Helix 47
AF2
D
282 287Right-handed 310
Helix 48
AF3
D
290 308Right-handed alpha
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There are 4 sheets in PDB entry 6K34. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 58first strand
Strand 2
B
61 66anti-parallel
Strand 3
B
108 112anti-parallel
Strand 4
B
77 81parallel
Strand 5
B
150 156parallel
Strand 6
B
178 184parallel
Strand 7
B
243 248parallel
Strand 8
B
271 276parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 58first strand
Strand 2
A
61 66anti-parallel
Strand 3
A
108 112anti-parallel
Strand 4
A
77 81parallel
Strand 5
A
150 155parallel
Strand 6
A
178 182parallel
Strand 7
A
243 248parallel
Strand 8
A
271 276parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 58first strand
Strand 2
C
61 66anti-parallel
Strand 3
C
108 112anti-parallel
Strand 4
C
77 81parallel
Strand 5
C
150 155parallel
Strand 6
C
178 182parallel
Strand 7
C
243 248parallel
Strand 8
C
271 276parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 58first strand
Strand 2
D
61 66anti-parallel
Strand 3
D
108 112anti-parallel
Strand 4
D
77 81parallel
Strand 5
D
150 155parallel
Strand 6
D
178 182parallel
Strand 7
D
243 248parallel
Strand 8
D
271 276parallel
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