Analysis of interatomic Contacts of Structural Units in PDB entry:
6K3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K3C entry

There are 2 chains in PDB entry 6K3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 174PRO 561
B
 ILE 177GLN 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 6K3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
221 226Right-handed 310
Helix 2
AA2
A
232 241Right-handed alpha
Helix 3
AA3
A
253 257Right-handed 310
Helix 4
AA4
A
260 267Right-handed alpha
Helix 5
AA5
A
268 281Right-handed alpha
Helix 6
AA6
A
291 307Right-handed alpha
Helix 7
AA7
A
328 334Right-handed 310
Helix 8
AA8
A
335 345Right-handed alpha
Helix 9
AA9
A
353 361Right-handed alpha
Helix 10
AB1
A
361 380Right-handed alpha
Helix 11
AB2
A
386 395Right-handed alpha
Helix 12
AB3
A
401 411Right-handed alpha
Helix 13
AB4
A
451 457Right-handed alpha
Helix 14
AB5
A
458 462Right-handed 310
Helix 15
AB6
A
476 482Right-handed alpha
Helix 16
AB7
A
501 508Right-handed alpha
Helix 17
AB8
A
516 525Right-handed alpha
Helix 18
AB9
A
552 556Right-handed 310
Helix 19
AC1
B
231 240Right-handed alpha
Helix 20
AC2
B
253 257Right-handed 310
Helix 21
AC3
B
260 267Right-handed alpha
Helix 22
AC4
B
268 280Right-handed alpha
Helix 23
AC5
B
291 305Right-handed alpha
Helix 24
AC6
B
328 333Right-handed 310
Helix 25
AC7
B
335 345Right-handed alpha
Helix 26
AC8
B
360 364Right-handed 310
Helix 27
AC9
B
367 380Right-handed alpha
Helix 28
AD1
B
388 393Right-handed alpha
Helix 29
AD2
B
394 399Right-handed alpha
Helix 30
AD3
B
400 411Right-handed alpha
Helix 31
AD4
B
431 435Right-handed 310
Helix 32
AD5
B
451 458Right-handed alpha
Helix 33
AD6
B
501 508Right-handed alpha
Helix 34
AD7
B
516 525Right-handed alpha
Helix 35
AD8
B
526 529Right-handed 310
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There are 6 sheets in PDB entry 6K3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 191first strand
Strand 2
A
195 200anti-parallel
Strand 3
A
244 249anti-parallel
Strand 4
A
212 215parallel
Strand 5
A
286 290parallel
Strand 6
A
315 318parallel
Strand 7
A
439 444parallel
Strand 8
A
468 473parallel
Strand 9
A
492 494anti-parallel
Strand 10
A
510 512anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
531 533anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 352first strand
Strand 2
A
399 400anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 425first strand
Strand 2
A
428 429anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 191first strand
Strand 2
B
195 200anti-parallel
Strand 3
B
244 249anti-parallel
Strand 4
B
212 215parallel
Strand 5
B
285 290parallel
Strand 6
B
312 318parallel
Strand 7
B
439 444parallel
Strand 8
B
468 474parallel
Strand 9
B
491 495anti-parallel
Strand 10
B
510 513anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 208first strand
Strand 2
B
531 533anti-parallel
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