Analysis of interatomic Contacts of Structural Units in PDB entry:
6K3G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K3G entry

There is 1 chain in PDB entry 6K3G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 4SER 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 6K3G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
50 58Right-handed alpha
Helix 2
AA2
B
106 111Right-handed alpha
Helix 3
AA3
B
112 117Right-handed 310
Helix 4
AA4
B
157 162Right-handed alpha
Helix 5
AA5
B
163 165Right-handed 310
Helix 6
AA6
B
166 178Right-handed alpha
Helix 7
AA7
B
193 207Right-handed alpha
Helix 8
AA8
B
216 218Right-handed 310
Helix 9
AA9
B
219 225Right-handed alpha
Helix 10
AB1
B
237 245Right-handed alpha
Helix 11
AB2
B
261 267Right-handed alpha
Helix 12
AB3
B
287 295Right-handed alpha
Helix 13
AB4
B
305 319Right-handed alpha
Helix 14
AB5
B
329 331Right-handed 310
Helix 15
AB6
B
332 342Right-handed alpha
Helix 16
AB7
B
353 357Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 6K3G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 18first strand
Strand 2
B
25 32anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 145first strand
Strand 2
B
39 48anti-parallel
Strand 3
B
74 81anti-parallel
Strand 4
B
93 96anti-parallel
Strand 5
B
149 151anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 145first strand
Strand 2
B
39 48anti-parallel
Strand 3
B
348 352anti-parallel
Strand 4
B
325 328parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 101first strand
Strand 2
B
121 122anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
209 214parallel
Strand 3
B
186 190parallel
Strand 4
B
248 253parallel
Strand 5
B
268 276parallel
Strand 6
B
297 300parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il