Analysis of interatomic Contacts of Structural Units in PDB entry:
6K4K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K4K entry

There are 2 chains in PDB entry 6K4K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 99ALA 848
B
 VAL 99THR 654
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 6K4K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
135 158Right-handed alpha
Helix 2
AA2
A
164 182Right-handed alpha
Helix 3
AA3
A
184 206Right-handed alpha
Helix 4
AA4
A
206 220Right-handed alpha
Helix 5
AA5
A
222 228Right-handed alpha
Helix 6
AA6
A
230 235Right-handed 310
Helix 7
AA7
A
236 246Right-handed alpha
Helix 8
AA8
A
251 261Right-handed alpha
Helix 9
AA9
A
264 269Right-handed 310
Helix 10
AB1
A
270 281Right-handed alpha
Helix 11
AB2
A
301 311Right-handed alpha
Helix 12
AB3
A
374 396Right-handed alpha
Helix 13
AB4
A
411 419Right-handed alpha
Helix 14
AB5
A
446 451Right-handed 310
Helix 15
AB6
A
459 481Right-handed alpha
Helix 16
AB7
A
509 514Right-handed alpha
Helix 17
AB8
A
525 530Right-handed alpha
Helix 18
AB9
A
550 554Right-handed 310
Helix 19
AC1
A
556 563Right-handed alpha
Helix 20
AC2
A
563 569Right-handed alpha
Helix 21
AC3
A
572 576Right-handed 310
Helix 22
AC4
A
586 592Right-handed 310
Helix 23
AC5
A
593 623Right-handed alpha
Helix 24
AC6
A
627 655Right-handed alpha
Helix 25
AC7
A
657 669Right-handed alpha
Helix 26
AC8
A
670 683Right-handed alpha
Helix 27
AC9
A
684 689Right-handed 310
Helix 28
AD1
A
692 703Right-handed alpha
Helix 29
AD2
A
738 774Right-handed alpha
Helix 30
AD3
A
780 794Right-handed alpha
Helix 31
AD4
A
799 817Right-handed alpha
Helix 32
AD5
A
825 843Right-handed alpha
Helix 33
AD6
B
135 157Right-handed alpha
Helix 34
AD7
B
164 182Right-handed alpha
Helix 35
AD8
B
184 206Right-handed alpha
Helix 36
AD9
B
206 220Right-handed alpha
Helix 37
AE1
B
222 228Right-handed alpha
Helix 38
AE2
B
230 235Right-handed 310
Helix 39
AE3
B
236 246Right-handed alpha
Helix 40
AE4
B
251 261Right-handed alpha
Helix 41
AE5
B
264 269Right-handed 310
Helix 42
AE6
B
270 281Right-handed alpha
Helix 43
AE7
B
301 311Right-handed alpha
Helix 44
AE8
B
374 396Right-handed alpha
Helix 45
AE9
B
411 420Right-handed alpha
Helix 46
AF1
B
446 451Right-handed 310
Helix 47
AF2
B
459 481Right-handed alpha
Helix 48
AF3
B
509 514Right-handed alpha
Helix 49
AF4
B
525 530Right-handed alpha
Helix 50
AF5
B
550 554Right-handed 310
Helix 51
AF6
B
556 563Right-handed alpha
Helix 52
AF7
B
563 569Right-handed alpha
Helix 53
AF8
B
572 576Right-handed 310
Helix 54
AF9
B
586 592Right-handed 310
Helix 55
AG1
B
593 623Right-handed alpha
Helix 56
AG2
B
627 655Right-handed alpha
Helix 57
AG3
B
657 669Right-handed alpha
Helix 58
AG4
B
670 683Right-handed alpha
Helix 59
AG5
B
684 689Right-handed 310
Helix 60
AG6
B
690 703Right-handed alpha
Helix 61
AG7
B
738 774Right-handed alpha
Helix 62
AG8
B
780 794Right-handed alpha
Helix 63
AG9
B
799 817Right-handed alpha
Helix 64
AH1
B
822 840Right-handed alpha
Helix 65
AH2
C
6 21Right-handed alpha
Helix 66
AH3
C
32 41Right-handed alpha
Helix 67
AH4
C
58 66Right-handed alpha
Helix 68
AH5
C
66 71Right-handed alpha
Helix 69
AH6
C
74 85Right-handed alpha
Helix 70
AH7
C
99 104Right-handed alpha
Helix 71
AH8
D
6 20Right-handed alpha
Helix 72
AH9
D
32 39Right-handed alpha
Helix 73
AI1
D
58 66Right-handed alpha
Helix 74
AI2
D
66 71Right-handed alpha
Helix 75
AI3
D
74 76Right-handed 310
Helix 76
AI4
D
77 83Right-handed alpha
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There are 10 sheets in PDB entry 6K4K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
316 320anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
127 133anti-parallel
Strand 3
A
583 585parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 293first strand
Strand 2
A
298 300anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 350first strand
Strand 2
A
353 357anti-parallel
Strand 3
A
363 368anti-parallel
Strand 4
A
438 445anti-parallel
Strand 5
A
403 410anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
547 548anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 109first strand
Strand 2
B
316 320anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 124first strand
Strand 2
B
127 133anti-parallel
Strand 3
B
583 585parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
291 293first strand
Strand 2
B
298 300anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 350first strand
Strand 2
B
353 357anti-parallel
Strand 3
B
363 368anti-parallel
Strand 4
B
438 445anti-parallel
Strand 5
B
403 410anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
482 483first strand
Strand 2
B
547 548anti-parallel
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