Analysis of interatomic Contacts of Structural Units in PDB entry:
6K6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K6L entry

There are 2 chains in PDB entry 6K6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3LEU 267
B
 VAL 3THR 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6K6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 40Right-handed alpha
Helix 2
AA2
A
41 44Right-handed 310
Helix 3
AA3
A
47 56Right-handed alpha
Helix 4
AA4
A
62 75Right-handed alpha
Helix 5
AA5
A
86 91Right-handed alpha
Helix 6
AA6
A
92 97Right-handed alpha
Helix 7
AA7
A
111 120Right-handed alpha
Helix 8
AA8
A
135 143Right-handed alpha
Helix 9
AA9
A
146 164Right-handed alpha
Helix 10
AB1
A
169 187Right-handed alpha
Helix 11
AB2
A
192 203Right-handed alpha
Helix 12
AB3
A
233 237Right-handed 310
Helix 13
AB4
B
28 40Right-handed alpha
Helix 14
AB5
B
41 44Right-handed 310
Helix 15
AB6
B
47 56Right-handed alpha
Helix 16
AB7
B
62 76Right-handed alpha
Helix 17
AB8
B
86 91Right-handed alpha
Helix 18
AB9
B
92 97Right-handed alpha
Helix 19
AC1
B
111 120Right-handed alpha
Helix 20
AC2
B
135 143Right-handed alpha
Helix 21
AC3
B
146 164Right-handed alpha
Helix 22
AC4
B
169 187Right-handed alpha
Helix 23
AC5
B
192 203Right-handed alpha
Helix 24
AC6
B
233 237Right-handed 310
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There are 4 sheets in PDB entry 6K6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
15 20anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 126first strand
Strand 2
A
208 213parallel
Strand 3
A
216 223anti-parallel
Strand 4
A
226 230anti-parallel
Strand 5
A
244 246anti-parallel
Strand 6
A
257 258anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 12first strand
Strand 2
B
15 20anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 126first strand
Strand 2
B
208 213parallel
Strand 3
B
216 223anti-parallel
Strand 4
B
226 230anti-parallel
Strand 5
B
244 246anti-parallel
Strand 6
B
257 258anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il