Analysis of interatomic Contacts of Structural Units in PDB entry:
6K6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K6T entry

There are 4 chains in PDB entry 6K6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21ALA 257
B
 SER 21ALA 257
C
 SER 21ALA 257
D
 SER 21ALA 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6K6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 61Right-handed alpha
Helix 2
AA2
A
67 86Right-handed alpha
Helix 3
AA3
A
108 118Right-handed alpha
Helix 4
AA4
A
121 123Right-handed 310
Helix 5
AA5
A
137 152Right-handed alpha
Helix 6
AA6
A
166 173Right-handed alpha
Helix 7
AA7
A
181 186Right-handed alpha
Helix 8
AA8
A
187 190Right-handed 310
Helix 9
AA9
A
191 208Right-handed alpha
Helix 10
AB1
A
219 229Right-handed alpha
Helix 11
AB2
A
251 256Right-handed 310
Helix 12
AB3
B
55 61Right-handed alpha
Helix 13
AB4
B
67 86Right-handed alpha
Helix 14
AB5
B
108 118Right-handed alpha
Helix 15
AB6
B
121 123Right-handed 310
Helix 16
AB7
B
138 152Right-handed alpha
Helix 17
AB8
B
166 173Right-handed alpha
Helix 18
AB9
B
181 186Right-handed alpha
Helix 19
AC1
B
187 190Right-handed 310
Helix 20
AC2
B
191 208Right-handed alpha
Helix 21
AC3
B
219 229Right-handed alpha
Helix 22
AC4
C
55 61Right-handed alpha
Helix 23
AC5
C
67 87Right-handed alpha
Helix 24
AC6
C
107 118Right-handed alpha
Helix 25
AC7
C
121 123Right-handed 310
Helix 26
AC8
C
138 152Right-handed alpha
Helix 27
AC9
C
166 173Right-handed alpha
Helix 28
AD1
C
181 186Right-handed alpha
Helix 29
AD2
C
187 190Right-handed 310
Helix 30
AD3
C
191 208Right-handed alpha
Helix 31
AD4
C
219 230Right-handed alpha
Helix 32
AD5
C
251 257Right-handed alpha
Helix 33
AD6
D
55 61Right-handed alpha
Helix 34
AD7
D
67 86Right-handed alpha
Helix 35
AD8
D
108 118Right-handed alpha
Helix 36
AD9
D
121 123Right-handed 310
Helix 37
AE1
D
138 151Right-handed alpha
Helix 38
AE2
D
166 173Right-handed alpha
Helix 39
AE3
D
182 185Right-handed 310
Helix 40
AE4
D
187 190Right-handed 310
Helix 41
AE5
D
191 208Right-handed alpha
Helix 42
AE6
D
219 230Right-handed alpha
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There are 4 sheets in PDB entry 6K6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
27 35anti-parallel
Strand 3
A
233 234anti-parallel
Strand 4
A
211 214parallel
Strand 5
A
177 180parallel
Strand 6
A
154 160parallel
Strand 7
A
125 129parallel
Strand 8
A
91 95parallel
Strand 9
A
40 49parallel
Strand 10
A
27 35anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 244first strand
Strand 2
B
26 35anti-parallel
Strand 3
B
233 234anti-parallel
Strand 4
B
211 214parallel
Strand 5
B
177 180parallel
Strand 6
B
154 160parallel
Strand 7
B
125 129parallel
Strand 8
B
91 95parallel
Strand 9
B
40 50parallel
Strand 10
B
26 35anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
243 244first strand
Strand 2
C
27 35anti-parallel
Strand 3
C
233 234anti-parallel
Strand 4
C
211 214parallel
Strand 5
C
177 180parallel
Strand 6
C
154 160parallel
Strand 7
C
125 129parallel
Strand 8
C
91 95parallel
Strand 9
C
40 49parallel
Strand 10
C
27 35anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
243 244first strand
Strand 2
D
27 35anti-parallel
Strand 3
D
233 234anti-parallel
Strand 4
D
211 214parallel
Strand 5
D
177 180parallel
Strand 6
D
154 160parallel
Strand 7
D
125 129parallel
Strand 8
D
91 95parallel
Strand 9
D
40 49parallel
Strand 10
D
27 35anti-parallel
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