Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K7G entry

There are 2 chains in PDB entry 6K7G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 35LYS 1063
C
ARG 27ARG 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 51 helices in PDB entry 6K7G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
63 74Right-handed alpha
Helix 2
AA2
A
75 88Right-handed alpha
Helix 3
AA3
A
101 132Right-handed alpha
Helix 4
AA4
A
149 151Right-handed 310
Helix 5
AA5
A
176 178Right-handed 310
Helix 6
AA6
A
208 215Right-handed alpha
Helix 7
AA7
A
288 323Right-handed alpha
Helix 8
AA8
A
339 352Right-handed alpha
Helix 9
AA9
A
353 355Right-handed 310
Helix 10
AB1
A
358 377Right-handed alpha
Helix 11
AB2
A
393 397Right-handed 310
Helix 12
AB3
A
398 401Right-handed 310
Helix 13
AB4
A
446 456Right-handed alpha
Helix 14
AB5
A
458 472Right-handed alpha
Helix 15
AB6
A
490 503Right-handed alpha
Helix 16
AB7
A
559 564Right-handed alpha
Helix 17
AB8
A
573 588Right-handed alpha
Helix 18
AB9
A
600 614Right-handed alpha
Helix 19
AC1
A
619 633Right-handed alpha
Helix 20
AC2
A
651 662Right-handed alpha
Helix 21
AC3
A
673 684Right-handed alpha
Helix 22
AC4
A
731 737Right-handed alpha
Helix 23
AC5
A
742 751Right-handed alpha
Helix 24
AC6
A
762 777Right-handed alpha
Helix 25
AC7
A
787 797Right-handed alpha
Helix 26
AC8
A
809 815Right-handed alpha
Helix 27
AC9
A
821 823Right-handed 310
Helix 28
AD1
A
824 831Right-handed alpha
Helix 29
AD2
A
833 856Right-handed alpha
Helix 30
AD3
A
856 861Right-handed alpha
Helix 31
AD4
A
861 866Right-handed alpha
Helix 32
AD5
A
875 880Right-handed alpha
Helix 33
AD6
A
887 896Right-handed alpha
Helix 34
AD7
A
901 908Right-handed alpha
Helix 35
AD8
A
910 918Right-handed alpha
Helix 36
AD9
A
922 948Right-handed alpha
Helix 37
AE1
A
961 985Right-handed alpha
Helix 38
AE2
A
989 1013Right-handed alpha
Helix 39
AE3
A
1025 1033Right-handed alpha
Helix 40
AE4
A
1034 1061Right-handed alpha
Helix 41
AE5
C
50 74Right-handed alpha
Helix 42
AE6
C
131 136Right-handed alpha
Helix 43
AE7
C
139 144Right-handed alpha
Helix 44
AE8
C
157 161Right-handed 310
Helix 45
AE9
C
172 177Right-handed alpha
Helix 46
AF1
C
206 212Right-handed alpha
Helix 47
AF2
C
222 227Right-handed alpha
Helix 48
AF3
C
239 243Right-handed 310
Helix 49
AF4
C
246 250Right-handed 310
Helix 50
AF5
C
255 261Right-handed alpha
Helix 51
AF6
C
323 350Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 6K7G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
36 40first strand
Strand 2
A
218 222anti-parallel
Strand 3
A
233 235anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
134 137first strand
Strand 2
A
144 147anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
155 160first strand
Strand 2
A
262 267anti-parallel
Strand 3
A
169 174anti-parallel
Strand 4
A
250 251anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
195 198first strand
Strand 2
A
180 183anti-parallel
Strand 3
A
257 258anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
390 391first strand
Strand 2
A
817 819anti-parallel
Strand 3
A
799 803parallel
Strand 4
A
780 785parallel
Strand 5
A
403 408parallel
Strand 6
A
665 669parallel
Strand 7
A
755 758parallel
Strand 8
A
726 728parallel
Strand 9
A
694 695parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
415 425first strand
Strand 2
A
641 648anti-parallel
Strand 3
A
590 598anti-parallel
Strand 4
A
553 558anti-parallel
Strand 5
A
543 545anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
506 508first strand
Strand 2
A
514 517anti-parallel
Strand 3
A
523 526anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
77 81first strand
Strand 2
C
307 313anti-parallel
Strand 3
C
118 125anti-parallel
Strand 4
C
269 276anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
102 103first strand
Strand 2
C
296 297anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
108 110first strand
Strand 2
C
289 293anti-parallel
Strand 3
C
185 188anti-parallel
Strand 4
C
194 196anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il