Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K7I entry

There are 2 chains in PDB entry 6K7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 35LYS 1063
C
 PRO 28ARG 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6K7I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 62Right-handed 310
Helix 2
AA2
A
63 74Right-handed alpha
Helix 3
AA3
A
75 88Right-handed alpha
Helix 4
AA4
A
101 129Right-handed alpha
Helix 5
AA5
A
176 180Right-handed 310
Helix 6
AA6
A
208 214Right-handed alpha
Helix 7
AA7
A
270 274Right-handed 310
Helix 8
AA8
A
288 323Right-handed alpha
Helix 9
AA9
A
339 352Right-handed alpha
Helix 10
AB1
A
353 355Right-handed 310
Helix 11
AB2
A
358 377Right-handed alpha
Helix 12
AB3
A
393 401Right-handed 310
Helix 13
AB4
A
447 455Right-handed alpha
Helix 14
AB5
A
458 472Right-handed alpha
Helix 15
AB6
A
490 502Right-handed alpha
Helix 16
AB7
A
559 567Right-handed alpha
Helix 17
AB8
A
571 585Right-handed alpha
Helix 18
AB9
A
600 617Right-handed alpha
Helix 19
AC1
A
619 623Right-handed 310
Helix 20
AC2
A
624 631Right-handed alpha
Helix 21
AC3
A
651 662Right-handed alpha
Helix 22
AC4
A
673 681Right-handed alpha
Helix 23
AC5
A
730 738Right-handed alpha
Helix 24
AC6
A
742 751Right-handed alpha
Helix 25
AC7
A
762 777Right-handed alpha
Helix 26
AC8
A
790 797Right-handed alpha
Helix 27
AC9
A
809 815Right-handed alpha
Helix 28
AD1
A
823 833Right-handed alpha
Helix 29
AD2
A
833 856Right-handed alpha
Helix 30
AD3
A
856 866Right-handed alpha
Helix 31
AD4
A
874 879Right-handed alpha
Helix 32
AD5
A
887 896Right-handed alpha
Helix 33
AD6
A
901 908Right-handed alpha
Helix 34
AD7
A
910 918Right-handed alpha
Helix 35
AD8
A
922 948Right-handed alpha
Helix 36
AD9
A
961 985Right-handed alpha
Helix 37
AE1
A
989 1011Right-handed alpha
Helix 38
AE2
A
1025 1033Right-handed alpha
Helix 39
AE3
A
1035 1061Right-handed alpha
Helix 40
AE4
C
46 74Right-handed alpha
Helix 41
AE5
C
89 95Right-handed 310
Helix 42
AE6
C
131 136Right-handed alpha
Helix 43
AE7
C
139 144Right-handed alpha
Helix 44
AE8
C
146 152Right-handed alpha
Helix 45
AE9
C
172 177Right-handed alpha
Helix 46
AF1
C
206 212Right-handed alpha
Helix 47
AF2
C
222 227Right-handed alpha
Helix 48
AF3
C
239 243Right-handed 310
Helix 49
AF4
C
254 262Right-handed alpha
Helix 50
AF5
C
323 350Right-handed alpha
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There are 9 sheets in PDB entry 6K7I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
218 220anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
A
134 137anti-parallel
Strand 3
A
156 159anti-parallel
Strand 4
A
263 267anti-parallel
Strand 5
A
169 171anti-parallel
Strand 6
A
250 251anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
195 197anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
817 819anti-parallel
Strand 3
A
799 803parallel
Strand 4
A
780 785parallel
Strand 5
A
403 408parallel
Strand 6
A
665 668parallel
Strand 7
A
755 758parallel
Strand 8
A
726 729parallel
Strand 9
A
693 695parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 425first strand
Strand 2
A
637 648anti-parallel
Strand 3
A
591 598anti-parallel
Strand 4
A
552 558anti-parallel
Strand 5
A
540 546anti-parallel
Strand 6
A
530 531anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 509first strand
Strand 2
A
514 517anti-parallel
Strand 3
A
523 526anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
308 313anti-parallel
Strand 3
C
118 124anti-parallel
Strand 4
C
269 276anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 103first strand
Strand 2
C
296 297anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 110first strand
Strand 2
C
289 293anti-parallel
Strand 3
C
185 188anti-parallel
Strand 4
C
194 196anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il