Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K7M entry

There are 2 chains in PDB entry 6K7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 35LYS 1063
C
 ARG 27TYR 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6K7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 73Right-handed alpha
Helix 2
AA2
A
75 88Right-handed alpha
Helix 3
AA3
A
101 131Right-handed alpha
Helix 4
AA4
A
149 151Right-handed 310
Helix 5
AA5
A
185 190Right-handed alpha
Helix 6
AA6
A
208 214Right-handed alpha
Helix 7
AA7
A
270 273Right-handed 310
Helix 8
AA8
A
274 279Right-handed alpha
Helix 9
AA9
A
288 324Right-handed alpha
Helix 10
AB1
A
339 351Right-handed alpha
Helix 11
AB2
A
352 355Right-handed 310
Helix 12
AB3
A
357 376Right-handed alpha
Helix 13
AB4
A
393 401Right-handed 310
Helix 14
AB5
A
447 452Right-handed alpha
Helix 15
AB6
A
458 472Right-handed alpha
Helix 16
AB7
A
490 502Right-handed alpha
Helix 17
AB8
A
559 567Right-handed alpha
Helix 18
AB9
A
573 588Right-handed alpha
Helix 19
AC1
A
600 617Right-handed alpha
Helix 20
AC2
A
621 630Right-handed alpha
Helix 21
AC3
A
651 662Right-handed alpha
Helix 22
AC4
A
673 684Right-handed alpha
Helix 23
AC5
A
731 738Right-handed alpha
Helix 24
AC6
A
741 752Right-handed alpha
Helix 25
AC7
A
762 778Right-handed alpha
Helix 26
AC8
A
787 789Right-handed 310
Helix 27
AC9
A
790 796Right-handed alpha
Helix 28
AD1
A
823 831Right-handed alpha
Helix 29
AD2
A
831 866Right-handed alpha
Helix 30
AD3
A
874 879Right-handed alpha
Helix 31
AD4
A
887 896Right-handed alpha
Helix 32
AD5
A
910 917Right-handed alpha
Helix 33
AD6
A
922 948Right-handed alpha
Helix 34
AD7
A
961 984Right-handed alpha
Helix 35
AD8
A
989 1012Right-handed alpha
Helix 36
AD9
A
1025 1032Right-handed alpha
Helix 37
AE1
A
1033 1061Right-handed alpha
Helix 38
AE2
C
46 73Right-handed alpha
Helix 39
AE3
C
91 95Right-handed 310
Helix 40
AE4
C
131 136Right-handed alpha
Helix 41
AE5
C
146 152Right-handed alpha
Helix 42
AE6
C
154 158Right-handed 310
Helix 43
AE7
C
172 177Right-handed alpha
Helix 44
AE8
C
206 211Right-handed alpha
Helix 45
AE9
C
222 227Right-handed alpha
Helix 46
AF1
C
239 243Right-handed 310
Helix 47
AF2
C
246 250Right-handed 310
Helix 48
AF3
C
254 262Right-handed alpha
Helix 49
AF4
C
323 349Right-handed alpha
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There are 8 sheets in PDB entry 6K7M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
217 221anti-parallel
Strand 3
A
234 235anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
145 147anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 159first strand
Strand 2
A
263 269anti-parallel
Strand 3
A
168 173anti-parallel
Strand 4
A
250 251anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
180 184anti-parallel
Strand 3
A
256 258anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
694 696first strand
Strand 2
A
726 730parallel
Strand 3
A
755 759parallel
Strand 4
A
665 669parallel
Strand 5
A
403 408parallel
Strand 6
A
780 785parallel
Strand 7
A
799 803parallel
Strand 8
A
817 819parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 425first strand
Strand 2
A
637 648anti-parallel
Strand 3
A
590 599anti-parallel
Strand 4
A
552 558anti-parallel
Strand 5
A
540 546anti-parallel
Strand 6
A
523 532anti-parallel
Strand 7
A
514 517anti-parallel
Strand 8
A
507 508anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
308 313anti-parallel
Strand 3
C
118 124anti-parallel
Strand 4
C
269 276anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 110first strand
Strand 2
C
289 297anti-parallel
Strand 3
C
182 188anti-parallel
Strand 4
C
194 196anti-parallel
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