Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K7N entry

There are 2 chains in PDB entry 6K7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 35LYS 1063
C
 ARG 27ARG 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6K7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 75Right-handed alpha
Helix 2
AA2
A
75 88Right-handed alpha
Helix 3
AA3
A
101 131Right-handed alpha
Helix 4
AA4
A
176 178Right-handed 310
Helix 5
AA5
A
210 215Right-handed alpha
Helix 6
AA6
A
270 274Right-handed 310
Helix 7
AA7
A
275 280Right-handed alpha
Helix 8
AA8
A
288 324Right-handed alpha
Helix 9
AA9
A
339 352Right-handed alpha
Helix 10
AB1
A
353 355Right-handed 310
Helix 11
AB2
A
358 377Right-handed alpha
Helix 12
AB3
A
393 397Right-handed 310
Helix 13
AB4
A
398 401Right-handed 310
Helix 14
AB5
A
447 455Right-handed alpha
Helix 15
AB6
A
462 466Right-handed 310
Helix 16
AB7
A
467 472Right-handed alpha
Helix 17
AB8
A
490 503Right-handed alpha
Helix 18
AB9
A
559 564Right-handed alpha
Helix 19
AC1
A
570 588Right-handed alpha
Helix 20
AC2
A
601 617Right-handed alpha
Helix 21
AC3
A
621 630Right-handed alpha
Helix 22
AC4
A
651 662Right-handed alpha
Helix 23
AC5
A
673 685Right-handed alpha
Helix 24
AC6
A
731 739Right-handed alpha
Helix 25
AC7
A
742 751Right-handed alpha
Helix 26
AC8
A
762 777Right-handed alpha
Helix 27
AC9
A
787 797Right-handed alpha
Helix 28
AD1
A
809 815Right-handed alpha
Helix 29
AD2
A
823 831Right-handed alpha
Helix 30
AD3
A
831 856Right-handed alpha
Helix 31
AD4
A
856 866Right-handed alpha
Helix 32
AD5
A
874 881Right-handed alpha
Helix 33
AD6
A
887 896Right-handed alpha
Helix 34
AD7
A
901 908Right-handed alpha
Helix 35
AD8
A
910 919Right-handed alpha
Helix 36
AD9
A
922 948Right-handed alpha
Helix 37
AE1
A
961 985Right-handed alpha
Helix 38
AE2
A
989 1011Right-handed alpha
Helix 39
AE3
A
1020 1024Right-handed 310
Helix 40
AE4
A
1025 1033Right-handed alpha
Helix 41
AE5
A
1033 1062Right-handed alpha
Helix 42
AE6
C
50 74Right-handed alpha
Helix 43
AE7
C
131 136Right-handed alpha
Helix 44
AE8
C
139 144Right-handed alpha
Helix 45
AE9
C
146 152Right-handed alpha
Helix 46
AF1
C
172 177Right-handed alpha
Helix 47
AF2
C
206 212Right-handed alpha
Helix 48
AF3
C
222 227Right-handed alpha
Helix 49
AF4
C
239 243Right-handed 310
Helix 50
AF5
C
250 253Right-handed 310
Helix 51
AF6
C
254 262Right-handed alpha
Helix 52
AF7
C
323 350Right-handed alpha
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There are 10 sheets in PDB entry 6K7N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
218 221anti-parallel
Strand 3
A
233 235anti-parallel
Strand 4
A
244 245anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 159first strand
Strand 2
A
263 267anti-parallel
Strand 3
A
169 173anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 183first strand
Strand 2
A
195 198anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
817 819anti-parallel
Strand 3
A
800 803parallel
Strand 4
A
780 785parallel
Strand 5
A
403 408parallel
Strand 6
A
665 669parallel
Strand 7
A
755 759parallel
Strand 8
A
727 730parallel
Strand 9
A
694 695parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 425first strand
Strand 2
A
641 648anti-parallel
Strand 3
A
590 591anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 517first strand
Strand 2
A
523 526anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
545 547first strand
Strand 2
A
551 558anti-parallel
Strand 3
A
593 598anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
307 314anti-parallel
Strand 3
C
118 125anti-parallel
Strand 4
C
269 276anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 110first strand
Strand 2
C
289 297anti-parallel
Strand 3
C
182 188anti-parallel
Strand 4
C
194 196anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 163first strand
Strand 2
C
166 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il