Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7Y

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6K7Y entry

There are 20 chains in PDB entry 6K7Y (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 73	ARG 345
B	ASP 73	ARG 345
C	ASP 73	GLY 348
D	ASP 73	ARG 345
E	VAL 48	GLU 101
F	VAL 48	GLU 101
G	VAL 48	GLU 101
H	VAL 48	GLU 101
I	GLY 105	GLN 476
J	PRO 83	SER 418
N	ASP 73	ARG 345
O	ASP 73	ARG 345
P	ASP 73	GLY 348
Q	ASP 73	ARG 345
R	VAL 48	GLU 101
S	VAL 48	GLU 101
T	VAL 48	GLU 101
U	VAL 48	GLU 101
V	GLY 105	GLN 476
W	PRO 83	SER 418

There are140 helices in PDB entry 6K7Y. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	107	120	Right-handed alpha
Helix 2	AA2	A	140	145	Right-handed alpha
Helix 3	AA3	A	170	190	Right-handed alpha
Helix 4	AA4	A	191	213	Right-handed alpha
Helix 5	AA5	A	214	256	Right-handed alpha
Helix 6	AA6	A	259	286	Right-handed alpha
Helix 7	AA7	A	290	311	Right-handed alpha
Helix 8	AA8	A	313	328	Right-handed alpha
Helix 9	AA9	A	328	333	Right-handed alpha
Helix 10	AB1	B	107	120	Right-handed alpha
Helix 11	AB2	B	140	145	Right-handed alpha
Helix 12	AB3	B	175	256	Right-handed alpha
Helix 13	AB4	B	259	286	Right-handed alpha
Helix 14	AB5	B	290	307	Right-handed alpha
Helix 15	AB6	B	313	340	Right-handed alpha
Helix 16	AB7	C	107	118	Right-handed alpha
Helix 17	AB8	C	140	145	Right-handed alpha
Helix 18	AB9	C	171	191	Right-handed alpha
Helix 19	AC1	C	192	256	Right-handed alpha
Helix 20	AC2	C	259	286	Right-handed alpha
Helix 21	AC3	C	290	310	Right-handed alpha
Helix 22	AC4	C	313	334	Right-handed alpha
Helix 23	AC5	C	335	340	Right-handed alpha
Helix 24	AC6	D	107	120	Right-handed alpha
Helix 25	AC7	D	140	145	Right-handed alpha
Helix 26	AC8	D	171	190	Right-handed alpha
Helix 27	AC9	D	191	211	Right-handed alpha
Helix 28	AD1	D	214	254	Right-handed alpha
Helix 29	AD2	D	259	286	Right-handed alpha
Helix 30	AD3	D	290	310	Right-handed alpha
Helix 31	AD4	D	313	335	Right-handed alpha
Helix 32	AD5	E	65	95	Right-handed alpha
Helix 33	AD6	F	65	95	Right-handed alpha
Helix 34	AD7	G	65	95	Right-handed alpha
Helix 35	AD8	H	65	95	Right-handed alpha
Helix 36	AD9	I	106	121	Right-handed alpha
Helix 37	AE1	I	123	131	Right-handed alpha
Helix 38	AE2	I	148	157	Right-handed alpha
Helix 39	AE3	I	193	201	Right-handed alpha
Helix 40	AE4	I	205	218	Right-handed alpha
Helix 41	AE5	I	219	231	Right-handed alpha
Helix 42	AE6	I	239	249	Right-handed alpha
Helix 43	AE7	I	278	283	Right-handed alpha
Helix 44	AE8	I	292	315	Right-handed alpha
Helix 45	AE9	I	323	335	Right-handed alpha
Helix 46	AF1	I	341	353	Right-handed alpha
Helix 47	AF2	I	360	373	Right-handed alpha
Helix 48	AF3	I	374	381	Right-handed alpha
Helix 49	AF4	I	392	403	Right-handed alpha
Helix 50	AF5	I	409	421	Right-handed alpha
Helix 51	AF6	I	433	441	Right-handed alpha
Helix 52	AF7	I	456	473	Right-handed alpha
Helix 53	AF8	J	84	94	Right-handed alpha
Helix 54	AF9	J	105	115	Right-handed alpha
Helix 55	AG1	J	128	137	Right-handed alpha
Helix 56	AG2	J	138	142	Right-handed 310
Helix 57	AG3	J	148	153	Right-handed alpha
Helix 58	AG4	J	159	171	Right-handed alpha
Helix 59	AG5	J	176	184	Right-handed alpha
Helix 60	AG6	J	193	210	Right-handed alpha
Helix 61	AG7	J	232	239	Right-handed alpha
Helix 62	AG8	J	248	272	Right-handed alpha
Helix 63	AG9	J	280	291	Right-handed alpha
Helix 64	AH1	J	296	306	Right-handed alpha
Helix 65	AH2	J	314	327	Right-handed alpha
Helix 66	AH3	J	327	340	Right-handed alpha
Helix 67	AH4	J	346	359	Right-handed alpha
Helix 68	AH5	J	363	375	Right-handed alpha
Helix 69	AH6	J	383	391	Right-handed alpha
Helix 70	AH7	J	404	417	Right-handed alpha
Helix 71	AH8	N	107	120	Right-handed alpha
Helix 72	AH9	N	140	145	Right-handed alpha
Helix 73	AI1	N	170	190	Right-handed alpha
Helix 74	AI2	N	191	213	Right-handed alpha
Helix 75	AI3	N	214	256	Right-handed alpha
Helix 76	AI4	N	259	286	Right-handed alpha
Helix 77	AI5	N	290	311	Right-handed alpha
Helix 78	AI6	N	313	328	Right-handed alpha
Helix 79	AI7	N	328	333	Right-handed alpha
Helix 80	AI8	O	107	120	Right-handed alpha
Helix 81	AI9	O	140	145	Right-handed alpha
Helix 82	AJ1	O	175	256	Right-handed alpha
Helix 83	AJ2	O	259	286	Right-handed alpha
Helix 84	AJ3	O	290	307	Right-handed alpha
Helix 85	AJ4	O	313	340	Right-handed alpha
Helix 86	AJ5	P	107	118	Right-handed alpha
Helix 87	AJ6	P	140	145	Right-handed alpha
Helix 88	AJ7	P	171	191	Right-handed alpha
Helix 89	AJ8	P	192	256	Right-handed alpha
Helix 90	AJ9	P	259	286	Right-handed alpha
Helix 91	AK1	P	290	310	Right-handed alpha
Helix 92	AK2	P	313	334	Right-handed alpha
Helix 93	AK3	P	335	340	Right-handed alpha
Helix 94	AK4	Q	107	120	Right-handed alpha
Helix 95	AK5	Q	140	145	Right-handed alpha
Helix 96	AK6	Q	171	190	Right-handed alpha
Helix 97	AK7	Q	191	211	Right-handed alpha
Helix 98	AK8	Q	214	254	Right-handed alpha
Helix 99	AK9	Q	259	286	Right-handed alpha
Helix 100	AL1	Q	290	310	Right-handed alpha
Helix 101	AL2	Q	313	335	Right-handed alpha
Helix 102	AL3	R	65	95	Right-handed alpha
Helix 103	AL4	S	65	95	Right-handed alpha
Helix 104	AL5	T	65	95	Right-handed alpha
Helix 105	AL6	U	65	95	Right-handed alpha
Helix 106	AL7	V	106	121	Right-handed alpha
Helix 107	AL8	V	123	131	Right-handed alpha
Helix 108	AL9	V	148	157	Right-handed alpha
Helix 109	AM1	V	193	201	Right-handed alpha
Helix 110	AM2	V	205	218	Right-handed alpha
Helix 111	AM3	V	219	231	Right-handed alpha
Helix 112	AM4	V	239	249	Right-handed alpha
Helix 113	AM5	V	278	283	Right-handed alpha
Helix 114	AM6	V	292	315	Right-handed alpha
Helix 115	AM7	V	323	335	Right-handed alpha
Helix 116	AM8	V	341	353	Right-handed alpha
Helix 117	AM9	V	360	373	Right-handed alpha
Helix 118	AN1	V	374	381	Right-handed alpha
Helix 119	AN2	V	392	403	Right-handed alpha
Helix 120	AN3	V	409	421	Right-handed alpha
Helix 121	AN4	V	433	441	Right-handed alpha
Helix 122	AN5	V	456	473	Right-handed alpha
Helix 123	AN6	W	84	94	Right-handed alpha
Helix 124	AN7	W	105	115	Right-handed alpha
Helix 125	AN8	W	128	137	Right-handed alpha
Helix 126	AN9	W	138	142	Right-handed 310
Helix 127	AO1	W	148	153	Right-handed alpha
Helix 128	AO2	W	159	171	Right-handed alpha
Helix 129	AO3	W	176	184	Right-handed alpha
Helix 130	AO4	W	193	210	Right-handed alpha
Helix 131	AO5	W	232	239	Right-handed alpha
Helix 132	AO6	W	248	272	Right-handed alpha
Helix 133	AO7	W	280	291	Right-handed alpha
Helix 134	AO8	W	296	306	Right-handed alpha
Helix 135	AO9	W	314	327	Right-handed alpha
Helix 136	AP1	W	327	340	Right-handed alpha
Helix 137	AP2	W	346	359	Right-handed alpha
Helix 138	AP3	W	363	375	Right-handed alpha
Helix 139	AP4	W	383	391	Right-handed alpha
Helix 140	AP5	W	404	417	Right-handed alpha

There are 20 sheets in PDB entry 6K7Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	80	first strand
Strand 2	A	83	90	anti-parallel
Strand 3	A	95	100	anti-parallel
Strand 4	D	134	135	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	128	first strand
Strand 2	A	149	152	anti-parallel
Strand 3	A	157	160	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	C	95	100	parallel
Strand 3	C	83	90	anti-parallel
Strand 4	C	76	80	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	80	first strand
Strand 2	B	83	89	anti-parallel
Strand 3	B	96	100	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	128	first strand
Strand 2	B	149	153	anti-parallel
Strand 3	B	157	160	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	135	first strand
Strand 2	D	96	100	parallel
Strand 3	D	83	89	anti-parallel
Strand 4	D	76	80	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	128	first strand
Strand 2	C	149	152	anti-parallel
Strand 3	C	157	160	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	128	first strand
Strand 2	D	149	153	anti-parallel
Strand 3	D	156	160	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	96	97	first strand
Strand 2	J	102	103	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	278	279	first strand
Strand 2	J	312	313	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	76	80	first strand
Strand 2	N	83	90	anti-parallel
Strand 3	N	95	100	anti-parallel
Strand 4	Q	134	135	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	126	128	first strand
Strand 2	N	149	152	anti-parallel
Strand 3	N	157	160	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	134	135	first strand
Strand 2	P	95	100	parallel
Strand 3	P	83	90	anti-parallel
Strand 4	P	76	80	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	76	80	first strand
Strand 2	O	83	89	anti-parallel
Strand 3	O	96	100	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	125	128	first strand
Strand 2	O	149	153	anti-parallel
Strand 3	O	157	160	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	134	135	first strand
Strand 2	Q	96	100	parallel
Strand 3	Q	83	89	anti-parallel
Strand 4	Q	76	80	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	126	128	first strand
Strand 2	P	149	152	anti-parallel
Strand 3	P	157	160	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	126	128	first strand
Strand 2	Q	149	153	anti-parallel
Strand 3	Q	156	160	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	96	97	first strand
Strand 2	W	102	103	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	278	279	first strand
Strand 2	W	312	313	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6K7Y

Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7Y