Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6K7Z entry

There are 4 chains in PDB entry 6K7Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LEU 278
B	SER 2	LEU 278
C	SER 2	LEU 278
D	SER 2	LEU 278

There are 62 helices in PDB entry 6K7Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	21	Right-handed 310
Helix 2	AA2	A	55	68	Right-handed alpha
Helix 3	AA3	A	82	90	Right-handed alpha
Helix 4	AA4	A	92	107	Right-handed alpha
Helix 5	AA5	A	118	123	Right-handed 310
Helix 6	AA6	A	129	145	Right-handed alpha
Helix 7	AA7	A	157	162	Right-handed 310
Helix 8	AA8	A	168	178	Right-handed alpha
Helix 9	AA9	A	179	181	Right-handed 310
Helix 10	AB1	A	197	210	Right-handed alpha
Helix 11	AB2	A	215	217	Right-handed 310
Helix 12	AB3	A	226	230	Right-handed 310
Helix 13	AB4	A	236	244	Right-handed alpha
Helix 14	AB5	A	244	252	Right-handed alpha
Helix 15	AB6	A	261	267	Right-handed 310
Helix 16	AB7	A	268	278	Right-handed alpha
Helix 17	AB8	B	14	21	Right-handed 310
Helix 18	AB9	B	55	68	Right-handed alpha
Helix 19	AC1	B	82	90	Right-handed alpha
Helix 20	AC2	B	92	107	Right-handed alpha
Helix 21	AC3	B	118	123	Right-handed 310
Helix 22	AC4	B	129	145	Right-handed alpha
Helix 23	AC5	B	157	162	Right-handed 310
Helix 24	AC6	B	168	178	Right-handed alpha
Helix 25	AC7	B	179	181	Right-handed 310
Helix 26	AC8	B	197	210	Right-handed alpha
Helix 27	AC9	B	215	217	Right-handed 310
Helix 28	AD1	B	226	230	Right-handed 310
Helix 29	AD2	B	236	244	Right-handed alpha
Helix 30	AD3	B	244	252	Right-handed alpha
Helix 31	AD4	B	261	267	Right-handed 310
Helix 32	AD5	B	268	278	Right-handed alpha
Helix 33	AD6	C	14	21	Right-handed 310
Helix 34	AD7	C	55	68	Right-handed alpha
Helix 35	AD8	C	82	91	Right-handed alpha
Helix 36	AD9	C	92	107	Right-handed alpha
Helix 37	AE1	C	118	123	Right-handed 310
Helix 38	AE2	C	129	145	Right-handed alpha
Helix 39	AE3	C	157	162	Right-handed 310
Helix 40	AE4	C	168	178	Right-handed alpha
Helix 41	AE5	C	179	181	Right-handed 310
Helix 42	AE6	C	197	210	Right-handed alpha
Helix 43	AE7	C	215	217	Right-handed 310
Helix 44	AE8	C	236	244	Right-handed alpha
Helix 45	AE9	C	244	252	Right-handed alpha
Helix 46	AF1	C	261	267	Right-handed 310
Helix 47	AF2	C	268	277	Right-handed alpha
Helix 48	AF3	D	14	21	Right-handed 310
Helix 49	AF4	D	55	68	Right-handed alpha
Helix 50	AF5	D	82	91	Right-handed alpha
Helix 51	AF6	D	92	107	Right-handed alpha
Helix 52	AF7	D	118	123	Right-handed 310
Helix 53	AF8	D	129	145	Right-handed alpha
Helix 54	AF9	D	157	162	Right-handed 310
Helix 55	AG1	D	168	178	Right-handed alpha
Helix 56	AG2	D	179	181	Right-handed 310
Helix 57	AG3	D	197	210	Right-handed alpha
Helix 58	AG4	D	215	217	Right-handed 310
Helix 59	AG5	D	236	244	Right-handed alpha
Helix 60	AG6	D	244	252	Right-handed alpha
Helix 61	AG7	D	261	267	Right-handed 310
Helix 62	AG8	D	268	277	Right-handed alpha

There are 8 sheets in PDB entry 6K7Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	43	first strand
Strand 2	A	25	33	anti-parallel
Strand 3	A	71	77	parallel
Strand 4	A	111	115	parallel
Strand 5	A	151	154	parallel
Strand 6	A	183	187	parallel
Strand 7	A	219	224	parallel
Strand 8	A	256	260	parallel
Strand 9	A	3	8	parallel
Strand 10	A	25	33	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	53	54	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	43	first strand
Strand 2	B	25	33	anti-parallel
Strand 3	B	71	77	parallel
Strand 4	B	111	115	parallel
Strand 5	B	151	154	parallel
Strand 6	B	183	187	parallel
Strand 7	B	219	224	parallel
Strand 8	B	256	260	parallel
Strand 9	B	3	8	parallel
Strand 10	B	25	33	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	50	first strand
Strand 2	B	53	54	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	C	25	32	anti-parallel
Strand 3	C	71	77	parallel
Strand 4	C	111	115	parallel
Strand 5	C	151	154	parallel
Strand 6	C	183	187	parallel
Strand 7	C	219	224	parallel
Strand 8	C	256	260	parallel
Strand 9	C	3	8	parallel
Strand 10	C	25	32	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	50	first strand
Strand 2	C	53	54	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	43	first strand
Strand 2	D	25	32	anti-parallel
Strand 3	D	71	77	parallel
Strand 4	D	111	115	parallel
Strand 5	D	151	154	parallel
Strand 6	D	183	187	parallel
Strand 7	D	219	224	parallel
Strand 8	D	256	260	parallel
Strand 9	D	3	8	parallel
Strand 10	D	25	32	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	D	53	54	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6K7Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7Z