Analysis of interatomic Contacts of Structural Units in PDB entry:
6K94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K94 entry

There are 3 chains in PDB entry 6K94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 73ALA 296
B
 ASN 71ALA 296
C
 SER 73SER 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6K94. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 90Right-handed alpha
Helix 2
AA2
A
91 93Right-handed 310
Helix 3
AA3
A
96 110Right-handed alpha
Helix 4
AA4
A
112 114Right-handed 310
Helix 5
AA5
A
115 137Right-handed alpha
Helix 6
AA6
A
138 141Right-handed 310
Helix 7
AA7
A
144 155Right-handed alpha
Helix 8
AA8
A
156 162Right-handed 310
Helix 9
AA9
A
173 190Right-handed alpha
Helix 10
AB1
A
191 195Right-handed 310
Helix 11
AB2
A
207 215Right-handed alpha
Helix 12
AB3
A
255 258Right-handed 310
Helix 13
AB4
A
260 263Right-handed 310
Helix 14
AB5
B
72 90Right-handed alpha
Helix 15
AB6
B
91 93Right-handed 310
Helix 16
AB7
B
96 109Right-handed alpha
Helix 17
AB8
B
115 137Right-handed alpha
Helix 18
AB9
B
138 141Right-handed 310
Helix 19
AC1
B
144 155Right-handed alpha
Helix 20
AC2
B
156 162Right-handed 310
Helix 21
AC3
B
173 190Right-handed alpha
Helix 22
AC4
B
191 195Right-handed 310
Helix 23
AC5
B
207 215Right-handed alpha
Helix 24
AC6
B
260 263Right-handed 310
Helix 25
AC7
C
74 90Right-handed alpha
Helix 26
AC8
C
91 93Right-handed 310
Helix 27
AC9
C
96 109Right-handed alpha
Helix 28
AD1
C
112 114Right-handed 310
Helix 29
AD2
C
115 137Right-handed alpha
Helix 30
AD3
C
138 141Right-handed 310
Helix 31
AD4
C
144 155Right-handed alpha
Helix 32
AD5
C
156 162Right-handed 310
Helix 33
AD6
C
173 190Right-handed alpha
Helix 34
AD7
C
191 195Right-handed 310
Helix 35
AD8
C
207 215Right-handed alpha
Helix 36
AD9
C
255 258Right-handed 310
Helix 37
AE1
C
260 263Right-handed 310
Helix 38
AE2
D
74 90Right-handed alpha
Helix 39
AE3
D
91 93Right-handed 310
Helix 40
AE4
D
96 109Right-handed alpha
Helix 41
AE5
D
115 137Right-handed alpha
Helix 42
AE6
D
138 141Right-handed 310
Helix 43
AE7
D
144 155Right-handed alpha
Helix 44
AE8
D
156 162Right-handed 310
Helix 45
AE9
D
173 190Right-handed alpha
Helix 46
AF1
D
191 195Right-handed 310
Helix 47
AF2
D
210 215Right-handed alpha
Helix 48
AF3
D
234 238Right-handed 310
Helix 49
AF4
D
260 263Right-handed 310
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There are 8 sheets in PDB entry 6K94. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 204first strand
Strand 2
A
242 248anti-parallel
Strand 3
A
288 295parallel
Strand 4
A
273 281anti-parallel
Strand 5
A
220 222anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 230first strand
Strand 2
A
265 268anti-parallel
Strand 3
A
252 253anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 204first strand
Strand 2
B
242 248anti-parallel
Strand 3
B
288 295parallel
Strand 4
B
273 280anti-parallel
Strand 5
B
220 222anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 230first strand
Strand 2
B
265 268anti-parallel
Strand 3
B
252 253anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
198 204first strand
Strand 2
C
242 248anti-parallel
Strand 3
C
288 294parallel
Strand 4
C
272 281anti-parallel
Strand 5
C
220 223anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
227 230first strand
Strand 2
C
265 268anti-parallel
Strand 3
C
252 253anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
233 234first strand
Strand 2
D
198 204anti-parallel
Strand 3
D
242 248anti-parallel
Strand 4
D
288 294parallel
Strand 5
D
273 280anti-parallel
Strand 6
D
220 222anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
227 230first strand
Strand 2
D
265 268anti-parallel
Strand 3
D
252 253anti-parallel
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