Analysis of interatomic Contacts of Structural Units in PDB entry:
6K96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K96 entry

There are 2 chains in PDB entry 6K96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3MET 355
B
 GLU 3ALA 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6K96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 33Right-handed alpha
Helix 2
AA2
A
35 39Right-handed 310
Helix 3
AA3
A
71 76Right-handed alpha
Helix 4
AA4
A
102 107Right-handed 310
Helix 5
AA5
A
110 123Right-handed alpha
Helix 6
AA6
A
136 150Right-handed alpha
Helix 7
AA7
A
165 175Right-handed alpha
Helix 8
AA8
A
189 204Right-handed alpha
Helix 9
AA9
A
219 226Right-handed alpha
Helix 10
AB1
A
260 263Right-handed 310
Helix 11
AB2
A
277 279Right-handed 310
Helix 12
AB3
A
292 314Right-handed alpha
Helix 13
AB4
A
319 326Right-handed 310
Helix 14
AB5
A
332 336Right-handed 310
Helix 15
AB6
A
337 355Right-handed alpha
Helix 16
AB7
B
13 32Right-handed alpha
Helix 17
AB8
B
35 39Right-handed 310
Helix 18
AB9
B
71 76Right-handed alpha
Helix 19
AC1
B
102 107Right-handed 310
Helix 20
AC2
B
110 123Right-handed alpha
Helix 21
AC3
B
136 150Right-handed alpha
Helix 22
AC4
B
165 175Right-handed alpha
Helix 23
AC5
B
189 204Right-handed alpha
Helix 24
AC6
B
219 226Right-handed alpha
Helix 25
AC7
B
234 240Right-handed alpha
Helix 26
AC8
B
260 263Right-handed 310
Helix 27
AC9
B
277 279Right-handed 310
Helix 28
AD1
B
292 314Right-handed alpha
Helix 29
AD2
B
319 326Right-handed 310
Helix 30
AD3
B
332 336Right-handed 310
Helix 31
AD4
B
337 354Right-handed alpha
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There are 6 sheets in PDB entry 6K96. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
55 62parallel
Strand 3
A
5 10parallel
Strand 4
A
127 130parallel
Strand 5
A
153 156parallel
Strand 6
A
179 180parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
50 51anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 258first strand
Strand 2
A
207 217parallel
Strand 3
A
265 275anti-parallel
Strand 4
A
281 291anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
55 62parallel
Strand 3
B
5 10parallel
Strand 4
B
127 130parallel
Strand 5
B
153 156parallel
Strand 6
B
179 180parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
50 51anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 258first strand
Strand 2
B
207 217parallel
Strand 3
B
265 275anti-parallel
Strand 4
B
281 291anti-parallel
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