Analysis of interatomic Contacts of Structural Units in PDB entry:
6K9B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K9B entry

There are 2 chains in PDB entry 6K9B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0TYR 292
B
 SER 0TYR 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6K9B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 4Right-handed 310
Helix 2
AA2
A
5 12Right-handed alpha
Helix 3
AA3
A
42 46Right-handed 310
Helix 4
AA4
A
48 60Right-handed alpha
Helix 5
AA5
A
91 101Right-handed alpha
Helix 6
AA6
A
165 171Right-handed 310
Helix 7
AA7
A
192 203Right-handed alpha
Helix 8
AA8
A
215 232Right-handed alpha
Helix 9
AA9
A
234 243Right-handed alpha
Helix 10
AB1
A
249 253Right-handed 310
Helix 11
AB2
A
261 273Right-handed alpha
Helix 12
AB3
B
1 4Right-handed 310
Helix 13
AB4
B
5 12Right-handed alpha
Helix 14
AB5
B
42 46Right-handed 310
Helix 15
AB6
B
48 60Right-handed alpha
Helix 16
AB7
B
91 101Right-handed alpha
Helix 17
AB8
B
165 171Right-handed 310
Helix 18
AB9
B
192 203Right-handed alpha
Helix 19
AC1
B
215 232Right-handed alpha
Helix 20
AC2
B
234 243Right-handed alpha
Helix 21
AC3
B
249 253Right-handed 310
Helix 22
AC4
B
261 273Right-handed alpha
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There are 6 sheets in PDB entry 6K9B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
17 23anti-parallel
Strand 3
A
63 67anti-parallel
Strand 4
A
146 149anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 107first strand
Strand 2
A
114 119anti-parallel
Strand 3
A
74 80anti-parallel
Strand 4
A
137 141anti-parallel
Strand 5
A
129 131anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 256first strand
Strand 2
A
259 260anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
17 23anti-parallel
Strand 3
B
63 67anti-parallel
Strand 4
B
146 149anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 107first strand
Strand 2
B
114 119anti-parallel
Strand 3
B
74 80anti-parallel
Strand 4
B
137 141anti-parallel
Strand 5
B
129 131anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 256first strand
Strand 2
B
259 260anti-parallel
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