Analysis of interatomic Contacts of Structural Units in PDB entry:
6K9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K9C entry

There are 2 chains in PDB entry 6K9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 303GLY 718
B
 LYS 305GLY 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6K9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
308 317Right-handed alpha
Helix 2
AA2
A
342 355Right-handed alpha
Helix 3
AA3
A
392 396Right-handed 310
Helix 4
AA4
A
404 415Right-handed alpha
Helix 5
AA5
A
418 436Right-handed alpha
Helix 6
AA6
A
452 465Right-handed alpha
Helix 7
AA7
A
473 478Right-handed alpha
Helix 8
AA8
A
482 486Right-handed 310
Helix 9
AA9
A
500 507Right-handed alpha
Helix 10
AB1
A
507 517Right-handed alpha
Helix 11
AB2
A
565 569Right-handed 310
Helix 12
AB3
A
575 583Right-handed alpha
Helix 13
AB4
A
583 593Right-handed alpha
Helix 14
AB5
A
607 618Right-handed alpha
Helix 15
AB6
A
619 630Right-handed alpha
Helix 16
AB7
A
632 639Right-handed alpha
Helix 17
AB8
A
642 647Right-handed alpha
Helix 18
AB9
A
651 665Right-handed alpha
Helix 19
AC1
A
669 681Right-handed alpha
Helix 20
AC2
A
685 693Right-handed alpha
Helix 21
AC3
B
308 317Right-handed alpha
Helix 22
AC4
B
342 355Right-handed alpha
Helix 23
AC5
B
392 396Right-handed 310
Helix 24
AC6
B
404 415Right-handed alpha
Helix 25
AC7
B
418 436Right-handed alpha
Helix 26
AC8
B
452 465Right-handed alpha
Helix 27
AC9
B
473 478Right-handed alpha
Helix 28
AD1
B
482 486Right-handed 310
Helix 29
AD2
B
500 517Right-handed alpha
Helix 30
AD3
B
565 569Right-handed 310
Helix 31
AD4
B
575 583Right-handed alpha
Helix 32
AD5
B
583 593Right-handed alpha
Helix 33
AD6
B
607 618Right-handed alpha
Helix 34
AD7
B
619 630Right-handed alpha
Helix 35
AD8
B
632 639Right-handed alpha
Helix 36
AD9
B
642 647Right-handed alpha
Helix 37
AE1
B
651 665Right-handed alpha
Helix 38
AE2
B
669 681Right-handed alpha
Helix 39
AE3
B
685 693Right-handed alpha
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There are 8 sheets in PDB entry 6K9C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 341first strand
Strand 2
A
329 334anti-parallel
Strand 3
A
320 324anti-parallel
Strand 4
A
365 369parallel
Strand 5
A
383 387parallel
Strand 6
A
377 380anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 472first strand
Strand 2
A
490 494parallel
Strand 3
A
537 542parallel
Strand 4
A
442 447parallel
Strand 5
A
557 562parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
519 522first strand
Strand 2
A
530 533anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 668first strand
Strand 2
A
710 717anti-parallel
Strand 3
A
700 707anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 341first strand
Strand 2
B
329 334anti-parallel
Strand 3
B
320 324anti-parallel
Strand 4
B
365 369parallel
Strand 5
B
383 387parallel
Strand 6
B
377 380anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
468 472first strand
Strand 2
B
490 494parallel
Strand 3
B
538 542parallel
Strand 4
B
442 447parallel
Strand 5
B
557 562parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
519 522first strand
Strand 2
B
530 533anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
666 668first strand
Strand 2
B
710 717anti-parallel
Strand 3
B
700 707anti-parallel
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