Analysis of interatomic Contacts of Structural Units in PDB entry:
6K9L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K9L entry

There are 2 chains in PDB entry 6K9L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2ALA 3054
B
SER 2ALA 3054
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are319 helices in PDB entry 6K9L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
24 36Right-handed alpha
Helix 3
AA3
A
39 44Right-handed alpha
Helix 4
AA4
A
59 66Right-handed alpha
Helix 5
AA5
A
68 78Right-handed alpha
Helix 6
AA6
A
94 109Right-handed alpha
Helix 7
AA7
A
117 127Right-handed alpha
Helix 8
AA8
A
147 154Right-handed alpha
Helix 9
AA9
A
157 162Right-handed alpha
Helix 10
AB1
A
166 177Right-handed alpha
Helix 11
AB2
A
182 199Right-handed alpha
Helix 12
AB3
A
204 207Right-handed 310
Helix 13
AB4
A
208 218Right-handed alpha
Helix 14
AB5
A
223 228Right-handed alpha
Helix 15
AB6
A
228 237Right-handed alpha
Helix 16
AB7
A
249 258Right-handed alpha
Helix 17
AB8
A
263 288Right-handed alpha
Helix 18
AB9
A
306 325Right-handed alpha
Helix 19
AC1
A
339 357Right-handed alpha
Helix 20
AC2
A
412 422Right-handed alpha
Helix 21
AC3
A
433 450Right-handed alpha
Helix 22
AC4
A
456 467Right-handed alpha
Helix 23
AC5
A
481 493Right-handed alpha
Helix 24
AC6
A
497 515Right-handed alpha
Helix 25
AC7
A
519 522Right-handed 310
Helix 26
AC8
A
523 530Right-handed alpha
Helix 27
AC9
A
537 539Right-handed 310
Helix 28
AD1
A
540 546Right-handed alpha
Helix 29
AD2
A
557 566Right-handed alpha
Helix 30
AD3
A
576 587Right-handed alpha
Helix 31
AD4
A
588 590Right-handed 310
Helix 32
AD5
A
603 607Right-handed 310
Helix 33
AD6
A
608 615Right-handed alpha
Helix 34
AD7
A
623 638Right-handed alpha
Helix 35
AD8
A
646 652Right-handed alpha
Helix 36
AD9
A
685 697Right-handed alpha
Helix 37
AE1
A
697 705Right-handed alpha
Helix 38
AE2
A
711 722Right-handed alpha
Helix 39
AE3
A
730 741Right-handed alpha
Helix 40
AE4
A
747 761Right-handed alpha
Helix 41
AE5
A
830 838Right-handed alpha
Helix 42
AE6
A
843 861Right-handed alpha
Helix 43
AE7
A
878 888Right-handed alpha
Helix 44
AE8
A
923 932Right-handed alpha
Helix 45
AE9
A
947 959Right-handed alpha
Helix 46
AF1
A
966 982Right-handed alpha
Helix 47
AF2
A
989 1005Right-handed alpha
Helix 48
AF3
A
1013 1020Right-handed alpha
Helix 49
AF4
A
1035 1039Right-handed 310
Helix 50
AF5
A
1042 1049Right-handed alpha
Helix 51
AF6
A
1058 1066Right-handed 310
Helix 52
AF7
A
1070 1089Right-handed alpha
Helix 53
AF8
A
1105 1126Right-handed alpha
Helix 54
AF9
A
1132 1143Right-handed alpha
Helix 55
AG1
A
1149 1158Right-handed alpha
Helix 56
AG2
A
1164 1170Right-handed alpha
Helix 57
AG3
A
1170 1175Right-handed alpha
Helix 58
AG4
A
1194 1196Right-handed 310
Helix 59
AG5
A
1197 1202Right-handed alpha
Helix 60
AG6
A
1212 1218Right-handed alpha
Helix 61
AG7
A
1219 1222Right-handed 310
Helix 62
AG8
A
1237 1244Right-handed alpha
Helix 63
AG9
A
1254 1271Right-handed alpha
Helix 64
AH1
A
1277 1282Right-handed alpha
Helix 65
AH2
A
1283 1285Right-handed 310
Helix 66
AH3
A
1294 1298Right-handed 310
Helix 67
AH4
A
1301 1307Right-handed alpha
Helix 68
AH5
A
1341 1345Right-handed 310
Helix 69
AH6
A
1353 1358Right-handed 310
Helix 70
AH7
A
1365 1373Right-handed alpha
Helix 71
AH8
A
1376 1381Right-handed alpha
Helix 72
AH9
A
1381 1386Right-handed alpha
Helix 73
AI1
A
1395 1399Right-handed 310
Helix 74
AI2
A
1417 1423Right-handed alpha
Helix 75
AI3
A
1436 1449Right-handed alpha
Helix 76
AI4
A
1457 1474Right-handed alpha
Helix 77
AI5
A
1477 1483Right-handed alpha
Helix 78
AI6
A
1484 1499Right-handed alpha
Helix 79
AI7
A
1500 1501Right-handed 310
Helix 80
AI8
A
1512 1513Right-handed 310
Helix 81
AI9
A
1514 1522Right-handed alpha
Helix 82
AJ1
A
1531 1533Right-handed 310
Helix 83
AJ2
A
1534 1544Right-handed alpha
Helix 84
AJ3
A
1549 1556Right-handed alpha
Helix 85
AJ4
A
1557 1563Right-handed alpha
Helix 86
AJ5
A
1569 1576Right-handed alpha
Helix 87
AJ6
A
1577 1584Right-handed 310
Helix 88
AJ7
A
1592 1603Right-handed alpha
Helix 89
AJ8
A
1611 1619Right-handed alpha
Helix 90
AJ9
A
1629 1634Right-handed alpha
Helix 91
AK1
A
1635 1639Right-handed 310
Helix 92
AK2
A
1640 1651Right-handed alpha
Helix 93
AK3
A
1657 1673Right-handed alpha
Helix 94
AK4
A
1677 1684Right-handed alpha
Helix 95
AK5
A
1702 1708Right-handed alpha
Helix 96
AK6
A
1714 1727Right-handed alpha
Helix 97
AK7
A
1735 1737Right-handed 310
Helix 98
AK8
A
1738 1744Right-handed alpha
Helix 99
AK9
A
1748 1750Right-handed 310
Helix 100
AL1
A
1751 1756Right-handed alpha
Helix 101
AL2
A
1760 1762Right-handed 310
Helix 102
AL3
A
1763 1769Right-handed alpha
Helix 103
AL4
A
1822 1825Right-handed 310
Helix 104
AL5
A
1826 1836Right-handed alpha
Helix 105
AL6
A
1841 1847Right-handed alpha
Helix 106
AL7
A
1855 1875Right-handed alpha
Helix 107
AL8
A
1878 1892Right-handed alpha
Helix 108
AL9
A
1904 1913Right-handed alpha
Helix 109
AM1
A
1926 1934Right-handed 310
Helix 110
AM2
A
1937 1949Right-handed alpha
Helix 111
AM3
A
1951 1969Right-handed alpha
Helix 112
AM4
A
1999 2013Right-handed alpha
Helix 113
AM5
A
2014 2022Right-handed alpha
Helix 114
AM6
A
2042 2048Right-handed alpha
Helix 115
AM7
A
2055 2058Right-handed 310
Helix 116
AM8
A
2059 2072Right-handed alpha
Helix 117
AM9
A
2075 2084Right-handed alpha
Helix 118
AN1
A
2095 2100Right-handed alpha
Helix 119
AN2
A
2124 2135Right-handed alpha
Helix 120
AN3
A
2140 2152Right-handed alpha
Helix 121
AN4
A
2154 2161Right-handed alpha
Helix 122
AN5
A
2169 2191Right-handed alpha
Helix 123
AN6
A
2194 2211Right-handed alpha
Helix 124
AN7
A
2212 2215Right-handed 310
Helix 125
AN8
A
2220 2233Right-handed alpha
Helix 126
AN9
A
2234 2236Right-handed 310
Helix 127
AO1
A
2240 2242Right-handed 310
Helix 128
AO2
A
2243 2264Right-handed alpha
Helix 129
AO3
A
2268 2281Right-handed alpha
Helix 130
AO4
A
2291 2302Right-handed alpha
Helix 131
AO5
A
2307 2322Right-handed alpha
Helix 132
AO6
A
2329 2349Right-handed alpha
Helix 133
AO7
A
2377 2420Right-handed alpha
Helix 134
AO8
A
2437 2474Right-handed alpha
Helix 135
AO9
A
2480 2484Right-handed 310
Helix 136
AP1
A
2485 2490Right-handed alpha
Helix 137
AP2
A
2499 2502Right-handed 310
Helix 138
AP3
A
2503 2508Right-handed alpha
Helix 139
AP4
A
2516 2518Right-handed 310
Helix 140
AP5
A
2519 2528Right-handed alpha
Helix 141
AP6
A
2536 2552Right-handed alpha
Helix 142
AP7
A
2552 2565Right-handed alpha
Helix 143
AP8
A
2595 2613Right-handed alpha
Helix 144
AP9
A
2616 2634Right-handed alpha
Helix 145
AQ1
A
2635 2640Right-handed alpha
Helix 146
AQ2
A
2653 2659Right-handed alpha
Helix 147
AQ3
A
2723 2728Right-handed alpha
Helix 148
AQ4
A
2729 2742Right-handed alpha
Helix 149
AQ5
A
2743 2747Right-handed 310
Helix 150
AQ6
A
2776 2780Right-handed alpha
Helix 151
AQ7
A
2786 2791Right-handed alpha
Helix 152
AQ8
A
2798 2809Right-handed alpha
Helix 153
AQ9
A
2815 2826Right-handed alpha
Helix 154
AR1
A
2830 2835Right-handed 310
Helix 155
AR2
A
2841 2867Right-handed alpha
Helix 156
AR3
A
2911 2918Right-handed alpha
Helix 157
AR4
A
2926 2936Right-handed alpha
Helix 158
AR5
A
2941 2953Right-handed alpha
Helix 159
AR6
A
2971 2979Right-handed alpha
Helix 160
AR7
A
3000 3017Right-handed alpha
Helix 161
AR8
A
3027 3038Right-handed alpha
Helix 162
AR9
A
3041 3046Right-handed alpha
Helix 163
AS1
B
3 16Right-handed alpha
Helix 164
AS2
B
24 36Right-handed alpha
Helix 165
AS3
B
39 44Right-handed alpha
Helix 166
AS4
B
59 66Right-handed alpha
Helix 167
AS5
B
68 78Right-handed alpha
Helix 168
AS6
B
94 109Right-handed alpha
Helix 169
AS7
B
117 129Right-handed alpha
Helix 170
AS8
B
147 154Right-handed alpha
Helix 171
AS9
B
166 177Right-handed alpha
Helix 172
AT1
B
182 199Right-handed alpha
Helix 173
AT2
B
204 207Right-handed 310
Helix 174
AT3
B
208 218Right-handed alpha
Helix 175
AT4
B
223 228Right-handed alpha
Helix 176
AT5
B
229 237Right-handed alpha
Helix 177
AT6
B
249 258Right-handed alpha
Helix 178
AT7
B
263 275Right-handed alpha
Helix 179
AT8
B
277 288Right-handed alpha
Helix 180
AT9
B
306 320Right-handed alpha
Helix 181
AU1
B
321 323Right-handed 310
Helix 182
AU2
B
339 345Right-handed alpha
Helix 183
AU3
B
345 356Right-handed alpha
Helix 184
AU4
B
412 420Right-handed alpha
Helix 185
AU5
B
433 449Right-handed alpha
Helix 186
AU6
B
457 469Right-handed alpha
Helix 187
AU7
B
475 492Right-handed alpha
Helix 188
AU8
B
497 515Right-handed alpha
Helix 189
AU9
B
523 531Right-handed alpha
Helix 190
AV1
B
537 539Right-handed 310
Helix 191
AV2
B
540 546Right-handed alpha
Helix 192
AV3
B
557 566Right-handed alpha
Helix 193
AV4
B
576 587Right-handed alpha
Helix 194
AV5
B
588 590Right-handed 310
Helix 195
AV6
B
603 607Right-handed 310
Helix 196
AV7
B
608 615Right-handed alpha
Helix 197
AV8
B
623 638Right-handed alpha
Helix 198
AV9
B
646 652Right-handed alpha
Helix 199
AW1
B
685 697Right-handed alpha
Helix 200
AW2
B
697 705Right-handed alpha
Helix 201
AW3
B
711 721Right-handed alpha
Helix 202
AW4
B
730 735Right-handed alpha
Helix 203
AW5
B
747 761Right-handed alpha
Helix 204
AW6
B
830 835Right-handed alpha
Helix 205
AW7
B
843 860Right-handed alpha
Helix 206
AW8
B
878 888Right-handed alpha
Helix 207
AW9
B
923 932Right-handed alpha
Helix 208
AX1
B
947 959Right-handed alpha
Helix 209
AX2
B
966 982Right-handed alpha
Helix 210
AX3
B
989 1005Right-handed alpha
Helix 211
AX4
B
1013 1020Right-handed alpha
Helix 212
AX5
B
1035 1039Right-handed 310
Helix 213
AX6
B
1042 1049Right-handed alpha
Helix 214
AX7
B
1058 1066Right-handed 310
Helix 215
AX8
B
1070 1089Right-handed alpha
Helix 216
AX9
B
1105 1115Right-handed alpha
Helix 217
AY1
B
1115 1126Right-handed alpha
Helix 218
AY2
B
1132 1143Right-handed alpha
Helix 219
AY3
B
1149 1158Right-handed alpha
Helix 220
AY4
B
1164 1170Right-handed alpha
Helix 221
AY5
B
1170 1175Right-handed alpha
Helix 222
AY6
B
1193 1202Right-handed alpha
Helix 223
AY7
B
1212 1218Right-handed alpha
Helix 224
AY8
B
1219 1222Right-handed 310
Helix 225
AY9
B
1237 1244Right-handed alpha
Helix 226
AZ1
B
1254 1271Right-handed alpha
Helix 227
AZ2
B
1277 1282Right-handed alpha
Helix 228
AZ3
B
1283 1285Right-handed 310
Helix 229
AZ4
B
1294 1298Right-handed 310
Helix 230
AZ5
B
1301 1307Right-handed alpha
Helix 231
AZ6
B
1353 1358Right-handed 310
Helix 232
AZ7
B
1365 1373Right-handed alpha
Helix 233
AZ8
B
1381 1386Right-handed alpha
Helix 234
AZ9
B
1395 1400Right-handed 310
Helix 235
BA1
B
1417 1423Right-handed alpha
Helix 236
BA2
B
1436 1449Right-handed alpha
Helix 237
BA3
B
1457 1474Right-handed alpha
Helix 238
BA4
B
1477 1483Right-handed alpha
Helix 239
BA5
B
1484 1501Right-handed alpha
Helix 240
BA6
B
1514 1522Right-handed alpha
Helix 241
BA7
B
1531 1533Right-handed 310
Helix 242
BA8
B
1534 1544Right-handed alpha
Helix 243
BA9
B
1549 1556Right-handed alpha
Helix 244
BB1
B
1557 1563Right-handed alpha
Helix 245
BB2
B
1569 1576Right-handed alpha
Helix 246
BB3
B
1577 1584Right-handed 310
Helix 247
BB4
B
1592 1603Right-handed alpha
Helix 248
BB5
B
1611 1619Right-handed alpha
Helix 249
BB6
B
1629 1634Right-handed alpha
Helix 250
BB7
B
1635 1639Right-handed 310
Helix 251
BB8
B
1640 1651Right-handed alpha
Helix 252
BB9
B
1657 1673Right-handed alpha
Helix 253
BC1
B
1677 1684Right-handed alpha
Helix 254
BC2
B
1705 1710Right-handed 310
Helix 255
BC3
B
1713 1726Right-handed alpha
Helix 256
BC4
B
1733 1737Right-handed 310
Helix 257
BC5
B
1738 1744Right-handed alpha
Helix 258
BC6
B
1748 1750Right-handed 310
Helix 259
BC7
B
1751 1756Right-handed alpha
Helix 260
BC8
B
1760 1762Right-handed 310
Helix 261
BC9
B
1763 1769Right-handed alpha
Helix 262
BD1
B
1822 1825Right-handed 310
Helix 263
BD2
B
1826 1836Right-handed alpha
Helix 264
BD3
B
1841 1847Right-handed alpha
Helix 265
BD4
B
1855 1875Right-handed alpha
Helix 266
BD5
B
1878 1892Right-handed alpha
Helix 267
BD6
B
1904 1913Right-handed alpha
Helix 268
BD7
B
1926 1934Right-handed 310
Helix 269
BD8
B
1937 1949Right-handed alpha
Helix 270
BD9
B
1951 1969Right-handed alpha
Helix 271
BE1
B
1999 2013Right-handed alpha
Helix 272
BE2
B
2014 2022Right-handed alpha
Helix 273
BE3
B
2057 2072Right-handed alpha
Helix 274
BE4
B
2075 2084Right-handed alpha
Helix 275
BE5
B
2095 2100Right-handed alpha
Helix 276
BE6
B
2124 2135Right-handed alpha
Helix 277
BE7
B
2140 2160Right-handed alpha
Helix 278
BE8
B
2169 2190Right-handed alpha
Helix 279
BE9
B
2194 2211Right-handed alpha
Helix 280
BF1
B
2212 2215Right-handed 310
Helix 281
BF2
B
2220 2233Right-handed alpha
Helix 282
BF3
B
2234 2236Right-handed 310
Helix 283
BF4
B
2240 2242Right-handed 310
Helix 284
BF5
B
2243 2264Right-handed alpha
Helix 285
BF6
B
2268 2274Right-handed alpha
Helix 286
BF7
B
2274 2281Right-handed alpha
Helix 287
BF8
B
2291 2302Right-handed alpha
Helix 288
BF9
B
2306 2322Right-handed alpha
Helix 289
BG1
B
2329 2349Right-handed alpha
Helix 290
BG2
B
2377 2420Right-handed alpha
Helix 291
BG3
B
2437 2474Right-handed alpha
Helix 292
BG4
B
2480 2484Right-handed 310
Helix 293
BG5
B
2485 2490Right-handed alpha
Helix 294
BG6
B
2499 2502Right-handed 310
Helix 295
BG7
B
2503 2508Right-handed alpha
Helix 296
BG8
B
2516 2518Right-handed 310
Helix 297
BG9
B
2519 2528Right-handed alpha
Helix 298
BH1
B
2536 2552Right-handed alpha
Helix 299
BH2
B
2552 2565Right-handed alpha
Helix 300
BH3
B
2595 2613Right-handed alpha
Helix 301
BH4
B
2616 2634Right-handed alpha
Helix 302
BH5
B
2635 2640Right-handed alpha
Helix 303
BH6
B
2653 2659Right-handed alpha
Helix 304
BH7
B
2723 2728Right-handed alpha
Helix 305
BH8
B
2729 2742Right-handed alpha
Helix 306
BH9
B
2743 2747Right-handed 310
Helix 307
BI1
B
2776 2780Right-handed alpha
Helix 308
BI2
B
2786 2791Right-handed alpha
Helix 309
BI3
B
2798 2809Right-handed alpha
Helix 310
BI4
B
2815 2826Right-handed alpha
Helix 311
BI5
B
2830 2835Right-handed 310
Helix 312
BI6
B
2841 2867Right-handed alpha
Helix 313
BI7
B
2911 2918Right-handed alpha
Helix 314
BI8
B
2926 2936Right-handed alpha
Helix 315
BI9
B
2941 2953Right-handed alpha
Helix 316
BJ1
B
2971 2979Right-handed alpha
Helix 317
BJ2
B
3000 3017Right-handed alpha
Helix 318
BJ3
B
3027 3038Right-handed alpha
Helix 319
BJ4
B
3041 3046Right-handed alpha
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There are 4 sheets in PDB entry 6K9L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2687 2691first strand
Strand 2
A
2700 2705anti-parallel
Strand 3
A
2711 2718anti-parallel
Strand 4
A
2764 2769anti-parallel
Strand 5
A
2757 2759anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2773 2775first strand
Strand 2
A
2876 2879anti-parallel
Strand 3
A
2885 2887anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2687 2691first strand
Strand 2
B
2700 2705anti-parallel
Strand 3
B
2711 2718anti-parallel
Strand 4
B
2764 2769anti-parallel
Strand 5
B
2757 2759anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2773 2775first strand
Strand 2
B
2876 2879anti-parallel
Strand 3
B
2885 2887anti-parallel
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