Analysis of interatomic Contacts of Structural Units in PDB entry:
6K9U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K9U entry

There is 1 chain in PDB entry 6K9U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 454GLU 760
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6K9U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
455 462Right-handed alpha
Helix 2
AA2
A
472 474Right-handed 310
Helix 3
AA3
A
475 487Right-handed alpha
Helix 4
AA4
A
494 509Right-handed alpha
Helix 5
AA5
A
516 533Right-handed alpha
Helix 6
AA6
A
539 553Right-handed alpha
Helix 7
AA7
A
561 569Right-handed alpha
Helix 8
AA8
A
570 576Right-handed alpha
Helix 9
AA9
A
579 594Right-handed alpha
Helix 10
AB1
A
605 623Right-handed alpha
Helix 11
AB2
A
624 641Right-handed alpha
Helix 12
AB3
A
648 665Right-handed alpha
Helix 13
AB4
A
666 670Right-handed 310
Helix 14
AB5
A
671 696Right-handed alpha
Helix 15
AB6
A
701 710Right-handed 310
Helix 16
AB7
A
711 723Right-handed alpha
Helix 17
AB8
A
723 735Right-handed alpha
Helix 18
AB9
A
738 757Right-handed alpha
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There are no sheets in PDB entry 6K9U
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il