Analysis of interatomic Contacts of Structural Units in PDB entry:
6KC6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6KC6 entry

There are 6 chains in PDB entry 6KC6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 867	ARG 1070
C	ASN 867	ARG 1070
E	ASN 867	ARG 1070
G	GLY 868	ARG 1070
I	ASN 867	ARG 1070
K	ASN 867	ARG 1070

There are 36 helices in PDB entry 6KC6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	930	935	Right-handed alpha
Helix 2	AA2	A	938	948	Right-handed alpha
Helix 3	AA3	A	998	1013	Right-handed alpha
Helix 4	AA4	A	1016	1021	Right-handed 310
Helix 5	AA5	A	1022	1035	Right-handed alpha
Helix 6	AA6	A	1045	1061	Right-handed alpha
Helix 7	AA7	C	930	935	Right-handed alpha
Helix 8	AA8	C	938	948	Right-handed alpha
Helix 9	AA9	C	998	1013	Right-handed alpha
Helix 10	AB1	C	1016	1021	Right-handed 310
Helix 11	AB2	C	1022	1035	Right-handed alpha
Helix 12	AB3	C	1045	1061	Right-handed alpha
Helix 13	AB4	E	930	935	Right-handed alpha
Helix 14	AB5	E	938	948	Right-handed alpha
Helix 15	AB6	E	998	1013	Right-handed alpha
Helix 16	AB7	E	1016	1021	Right-handed 310
Helix 17	AB8	E	1022	1035	Right-handed alpha
Helix 18	AB9	E	1045	1061	Right-handed alpha
Helix 19	AC1	G	930	935	Right-handed alpha
Helix 20	AC2	G	938	948	Right-handed alpha
Helix 21	AC3	G	998	1013	Right-handed alpha
Helix 22	AC4	G	1016	1021	Right-handed 310
Helix 23	AC5	G	1022	1035	Right-handed alpha
Helix 24	AC6	G	1045	1061	Right-handed alpha
Helix 25	AC7	I	930	935	Right-handed alpha
Helix 26	AC8	I	938	948	Right-handed alpha
Helix 27	AC9	I	998	1013	Right-handed alpha
Helix 28	AD1	I	1016	1021	Right-handed 310
Helix 29	AD2	I	1022	1035	Right-handed alpha
Helix 30	AD3	I	1045	1061	Right-handed alpha
Helix 31	AD4	K	930	935	Right-handed alpha
Helix 32	AD5	K	938	948	Right-handed alpha
Helix 33	AD6	K	998	1013	Right-handed alpha
Helix 34	AD7	K	1016	1021	Right-handed 310
Helix 35	AD8	K	1022	1035	Right-handed alpha
Helix 36	AD9	K	1045	1061	Right-handed alpha

There are 24 sheets in PDB entry 6KC6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	869	870	first strand
Strand 2	A	877	878	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	887	889	first strand
Strand 2	A	896	898	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	905	906	first strand
Strand 2	A	923	924	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	972	973	first strand
Strand 2	A	984	985	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	869	870	first strand
Strand 2	C	877	878	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	887	889	first strand
Strand 2	C	896	898	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	905	906	first strand
Strand 2	C	923	924	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	972	973	first strand
Strand 2	C	984	985	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	869	870	first strand
Strand 2	E	877	878	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	887	889	first strand
Strand 2	E	896	898	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	905	906	first strand
Strand 2	E	923	924	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	972	973	first strand
Strand 2	E	984	985	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	869	870	first strand
Strand 2	G	877	878	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	887	889	first strand
Strand 2	G	896	898	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	905	906	first strand
Strand 2	G	923	924	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	972	973	first strand
Strand 2	G	984	985	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	869	870	first strand
Strand 2	I	877	878	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	887	889	first strand
Strand 2	I	896	898	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	905	906	first strand
Strand 2	I	923	924	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	972	973	first strand
Strand 2	I	984	985	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	869	870	first strand
Strand 2	K	877	878	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	887	889	first strand
Strand 2	K	896	898	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	905	906	first strand
Strand 2	K	923	924	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	972	973	first strand
Strand 2	K	984	985	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6KC6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6KC6