Analysis of interatomic Contacts of Structural Units in PDB entry:
6KCW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KCW entry

There is 1 chain in PDB entry 6KCW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 19HIS 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6KCW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 46Right-handed alpha
Helix 2
AA2
A
72 77Right-handed alpha
Helix 3
AA3
A
125 129Right-handed 310
Helix 4
AA4
A
218 222Right-handed 310
Helix 5
AA5
A
237 241Right-handed 310
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There are 3 sheets in PDB entry 6KCW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
246 259anti-parallel
Strand 3
A
62 67anti-parallel
Strand 4
A
56 59anti-parallel
Strand 5
A
34 35anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
246 259anti-parallel
Strand 3
A
89 98anti-parallel
Strand 4
A
180 188anti-parallel
Strand 5
A
197 203anti-parallel
Strand 6
A
206 213anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 87first strand
Strand 2
A
224 233anti-parallel
Strand 3
A
107 117anti-parallel
Strand 4
A
131 140anti-parallel
Strand 5
A
146 153anti-parallel
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