Analysis of interatomic Contacts of Structural Units in PDB entry:
6KE1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KE1 entry

There are 2 chains in PDB entry 6KE1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 16LEU 279
B
 LEU 20PRO 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6KE1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 75Right-handed alpha
Helix 2
AA2
A
101 112Right-handed alpha
Helix 3
AA3
A
112 127Right-handed alpha
Helix 4
AA4
A
137 160Right-handed alpha
Helix 5
AA5
A
181 202Right-handed alpha
Helix 6
AA6
A
217 242Right-handed alpha
Helix 7
AA7
A
246 262Right-handed alpha
Helix 8
AA8
A
264 275Right-handed alpha
Helix 9
AA9
B
66 75Right-handed alpha
Helix 10
AB1
B
100 112Right-handed alpha
Helix 11
AB2
B
112 128Right-handed alpha
Helix 12
AB3
B
137 160Right-handed alpha
Helix 13
AB4
B
178 202Right-handed alpha
Helix 14
AB5
B
217 242Right-handed alpha
Helix 15
AB6
B
246 262Right-handed alpha
Helix 16
AB7
B
263 276Right-handed alpha
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There are 2 sheets in PDB entry 6KE1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
55 58parallel
Strand 3
A
78 81parallel
Strand 4
A
89 92anti-parallel
Strand 5
B
89 94anti-parallel
Strand 6
B
78 82anti-parallel
Strand 7
B
55 58parallel
Strand 8
B
22 25parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
36 41anti-parallel
Strand 3
A
29 33anti-parallel
Strand 4
A
63 65parallel
Strand 5
B
63 65anti-parallel
Strand 6
B
28 33parallel
Strand 7
B
36 41anti-parallel
Strand 8
B
45 48anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il