Analysis of interatomic Contacts of Structural Units in PDB entry:
6KE3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6KE3 entry

There are 8 chains in PDB entry 6KE3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 3	ASP 337
B	SER 14	GLU 351
C	GLY 3	ASP 337
D	SER 14	GLU 351
E	THR 6	ASP 337
F	SER 14	GLU 351
G	VAL 4	ASP 337
H	SER 14	GLU 351

There are105 helices in PDB entry 6KE3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	31	Right-handed alpha
Helix 2	AA2	A	54	65	Right-handed alpha
Helix 3	AA3	A	82	90	Right-handed alpha
Helix 4	AA4	A	123	126	Right-handed 310
Helix 5	AA5	A	146	163	Right-handed alpha
Helix 6	AA6	A	177	195	Right-handed alpha
Helix 7	AA7	A	205	215	Right-handed alpha
Helix 8	AA8	A	230	240	Right-handed alpha
Helix 9	AA9	A	242	245	Right-handed 310
Helix 10	AB1	A	253	255	Right-handed 310
Helix 11	AB2	A	277	292	Right-handed alpha
Helix 12	AB3	A	293	311	Right-handed alpha
Helix 13	AB4	A	315	319	Right-handed 310
Helix 14	AB5	A	323	337	Right-handed alpha
Helix 15	AB6	B	25	41	Right-handed alpha
Helix 16	AB7	B	59	74	Right-handed alpha
Helix 17	AB8	B	93	102	Right-handed alpha
Helix 18	AB9	B	134	139	Right-handed 310
Helix 19	AC1	B	157	174	Right-handed alpha
Helix 20	AC2	B	190	206	Right-handed alpha
Helix 21	AC3	B	216	226	Right-handed alpha
Helix 22	AC4	B	227	230	Right-handed 310
Helix 23	AC5	B	241	251	Right-handed alpha
Helix 24	AC6	B	288	302	Right-handed alpha
Helix 25	AC7	B	304	316	Right-handed alpha
Helix 26	AC8	B	317	322	Right-handed alpha
Helix 27	AC9	B	334	349	Right-handed alpha
Helix 28	AD1	C	15	31	Right-handed alpha
Helix 29	AD2	C	54	63	Right-handed alpha
Helix 30	AD3	C	82	90	Right-handed alpha
Helix 31	AD4	C	123	127	Right-handed 310
Helix 32	AD5	C	146	164	Right-handed alpha
Helix 33	AD6	C	177	195	Right-handed alpha
Helix 34	AD7	C	205	215	Right-handed alpha
Helix 35	AD8	C	216	219	Right-handed 310
Helix 36	AD9	C	230	241	Right-handed alpha
Helix 37	AE1	C	242	246	Right-handed 310
Helix 38	AE2	C	266	270	Right-handed 310
Helix 39	AE3	C	277	291	Right-handed alpha
Helix 40	AE4	C	293	309	Right-handed alpha
Helix 41	AE5	C	315	319	Right-handed 310
Helix 42	AE6	C	323	337	Right-handed alpha
Helix 43	AE7	D	25	41	Right-handed alpha
Helix 44	AE8	D	59	74	Right-handed alpha
Helix 45	AE9	D	93	102	Right-handed alpha
Helix 46	AF1	D	134	139	Right-handed 310
Helix 47	AF2	D	160	175	Right-handed alpha
Helix 48	AF3	D	188	205	Right-handed alpha
Helix 49	AF4	D	216	226	Right-handed alpha
Helix 50	AF5	D	227	230	Right-handed 310
Helix 51	AF6	D	241	252	Right-handed alpha
Helix 52	AF7	D	288	302	Right-handed alpha
Helix 53	AF8	D	304	322	Right-handed alpha
Helix 54	AF9	D	334	348	Right-handed alpha
Helix 55	AG1	D	349	351	Right-handed 310
Helix 56	AG2	E	15	30	Right-handed alpha
Helix 57	AG3	E	54	65	Right-handed alpha
Helix 58	AG4	E	83	91	Right-handed alpha
Helix 59	AG5	E	123	127	Right-handed 310
Helix 60	AG6	E	146	163	Right-handed alpha
Helix 61	AG7	E	177	195	Right-handed alpha
Helix 62	AG8	E	205	213	Right-handed alpha
Helix 63	AG9	E	215	219	Right-handed 310
Helix 64	AH1	E	230	241	Right-handed alpha
Helix 65	AH2	E	277	292	Right-handed alpha
Helix 66	AH3	E	293	311	Right-handed alpha
Helix 67	AH4	E	323	331	Right-handed alpha
Helix 68	AH5	E	331	336	Right-handed alpha
Helix 69	AH6	F	25	41	Right-handed alpha
Helix 70	AH7	F	59	74	Right-handed alpha
Helix 71	AH8	F	95	103	Right-handed alpha
Helix 72	AH9	F	134	139	Right-handed 310
Helix 73	AI1	F	157	174	Right-handed alpha
Helix 74	AI2	F	188	206	Right-handed alpha
Helix 75	AI3	F	216	223	Right-handed alpha
Helix 76	AI4	F	224	225	Right-handed 310
Helix 77	AI5	F	226	230	Right-handed 310
Helix 78	AI6	F	241	250	Right-handed alpha
Helix 79	AI7	F	288	302	Right-handed alpha
Helix 80	AI8	F	304	322	Right-handed alpha
Helix 81	AI9	F	334	348	Right-handed alpha
Helix 82	AJ1	G	15	29	Right-handed alpha
Helix 83	AJ2	G	54	65	Right-handed alpha
Helix 84	AJ3	G	83	90	Right-handed alpha
Helix 85	AJ4	G	145	163	Right-handed alpha
Helix 86	AJ5	G	177	194	Right-handed alpha
Helix 87	AJ6	G	205	215	Right-handed alpha
Helix 88	AJ7	G	230	241	Right-handed alpha
Helix 89	AJ8	G	277	292	Right-handed alpha
Helix 90	AJ9	G	294	311	Right-handed alpha
Helix 91	AK1	G	323	336	Right-handed alpha
Helix 92	AK2	H	25	41	Right-handed alpha
Helix 93	AK3	H	59	74	Right-handed alpha
Helix 94	AK4	H	93	102	Right-handed alpha
Helix 95	AK5	H	157	174	Right-handed alpha
Helix 96	AK6	H	188	206	Right-handed alpha
Helix 97	AK7	H	216	226	Right-handed alpha
Helix 98	AK8	H	227	230	Right-handed 310
Helix 99	AK9	H	241	251	Right-handed alpha
Helix 100	AL1	H	252	256	Right-handed 310
Helix 101	AL2	H	288	302	Right-handed alpha
Helix 102	AL3	H	304	322	Right-handed alpha
Helix 103	AL4	H	326	330	Right-handed 310
Helix 104	AL5	H	334	348	Right-handed alpha
Helix 105	AL6	H	349	351	Right-handed 310

There are 18 sheets in PDB entry 6KE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	38	first strand
Strand 2	A	5	10	parallel
Strand 3	A	67	69	parallel
Strand 4	A	257	261	parallel
Strand 5	A	247	251	anti-parallel
Strand 6	A	95	101	anti-parallel
Strand 7	A	114	120	anti-parallel
Strand 8	A	221	224	parallel
Strand 9	A	167	172	parallel
Strand 10	A	199	204	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	134	first strand
Strand 2	A	137	145	anti-parallel
Strand 3	B	148	156	anti-parallel
Strand 4	B	140	143	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	48	first strand
Strand 2	B	15	22	parallel
Strand 3	B	76	80	parallel
Strand 4	B	267	271	parallel
Strand 5	B	258	263	anti-parallel
Strand 6	B	104	112	anti-parallel
Strand 7	B	125	130	anti-parallel
Strand 8	B	232	235	parallel
Strand 9	B	178	183	parallel
Strand 10	B	210	215	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	9	first strand
Strand 2	C	35	38	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	68	first strand
Strand 2	C	258	259	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	C	114	120	anti-parallel
Strand 3	C	99	101	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	C	114	120	anti-parallel
Strand 3	C	221	224	parallel
Strand 4	C	167	172	parallel
Strand 5	C	199	204	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	134	first strand
Strand 2	C	137	145	anti-parallel
Strand 3	D	148	156	anti-parallel
Strand 4	D	140	144	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	48	first strand
Strand 2	D	15	20	parallel
Strand 3	D	76	78	parallel
Strand 4	D	267	271	parallel
Strand 5	D	258	262	anti-parallel
Strand 6	D	106	112	anti-parallel
Strand 7	D	125	131	anti-parallel
Strand 8	D	232	235	parallel
Strand 9	D	178	183	parallel
Strand 10	D	210	215	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	68	first strand
Strand 2	E	257	259	parallel
Strand 3	E	250	251	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	101	first strand
Strand 2	E	114	120	anti-parallel
Strand 3	E	221	224	parallel
Strand 4	E	167	172	parallel
Strand 5	E	199	204	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	132	first strand
Strand 2	E	137	145	anti-parallel
Strand 3	F	148	156	anti-parallel
Strand 4	F	140	145	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	48	first strand
Strand 2	F	15	20	parallel
Strand 3	F	75	78	parallel
Strand 4	F	267	271	parallel
Strand 5	F	258	263	anti-parallel
Strand 6	F	104	112	anti-parallel
Strand 7	F	125	131	anti-parallel
Strand 8	F	232	235	parallel
Strand 9	F	178	183	parallel
Strand 10	F	210	215	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	9	first strand
Strand 2	G	34	38	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	67	first strand
Strand 2	G	257	261	parallel
Strand 3	G	247	251	anti-parallel
Strand 4	G	95	97	anti-parallel
Strand 5	G	114	119	anti-parallel
Strand 6	G	100	101	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	67	first strand
Strand 2	G	257	261	parallel
Strand 3	G	247	251	anti-parallel
Strand 4	G	95	97	anti-parallel
Strand 5	G	114	119	anti-parallel
Strand 6	G	221	224	parallel
Strand 7	G	167	172	parallel
Strand 8	G	199	204	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	124	134	first strand
Strand 2	G	137	144	anti-parallel
Strand 3	H	149	156	anti-parallel
Strand 4	H	140	143	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	48	first strand
Strand 2	H	15	22	parallel
Strand 3	H	75	80	parallel
Strand 4	H	267	271	parallel
Strand 5	H	258	262	anti-parallel
Strand 6	H	106	112	anti-parallel
Strand 7	H	125	131	anti-parallel
Strand 8	H	232	235	parallel
Strand 9	H	178	183	parallel
Strand 10	H	210	215	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6KE3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6KE3