Analysis of interatomic Contacts of Structural Units in PDB entry:
6KET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KET entry

There are 2 chains in PDB entry 6KET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3GLN 350
B
 THR 3GLN 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6KET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 36Right-handed alpha
Helix 2
AA2
A
57 69Right-handed alpha
Helix 3
AA3
A
82 84Right-handed 310
Helix 4
AA4
A
85 100Right-handed alpha
Helix 5
AA5
A
115 120Right-handed 310
Helix 6
AA6
A
126 143Right-handed alpha
Helix 7
AA7
A
179 190Right-handed alpha
Helix 8
AA8
A
201 219Right-handed alpha
Helix 9
AA9
A
222 226Right-handed 310
Helix 10
AB1
A
239 256Right-handed alpha
Helix 11
AB2
A
258 269Right-handed alpha
Helix 12
AB3
A
279 298Right-handed alpha
Helix 13
AB4
A
303 317Right-handed alpha
Helix 14
AB5
A
331 350Right-handed alpha
Helix 15
AB6
B
23 36Right-handed alpha
Helix 16
AB7
B
57 69Right-handed alpha
Helix 17
AB8
B
82 84Right-handed 310
Helix 18
AB9
B
85 100Right-handed alpha
Helix 19
AC1
B
115 120Right-handed 310
Helix 20
AC2
B
126 144Right-handed alpha
Helix 21
AC3
B
179 190Right-handed alpha
Helix 22
AC4
B
201 219Right-handed alpha
Helix 23
AC5
B
222 226Right-handed 310
Helix 24
AC6
B
239 257Right-handed alpha
Helix 25
AC7
B
258 269Right-handed alpha
Helix 26
AC8
B
288 298Right-handed alpha
Helix 27
AC9
B
303 317Right-handed alpha
Helix 28
AD1
B
331 350Right-handed alpha
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There are 4 sheets in PDB entry 6KET. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 302first strand
Strand 2
A
228 236parallel
Strand 3
A
321 325parallel
Strand 4
A
5 9parallel
Strand 5
A
40 43parallel
Strand 6
A
73 80parallel
Strand 7
A
104 109parallel
Strand 8
A
172 175parallel
Strand 9
A
192 196parallel
Strand 10
A
228 236parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 150first strand
Strand 2
A
156 159anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 302first strand
Strand 2
B
228 236parallel
Strand 3
B
321 325parallel
Strand 4
B
5 9parallel
Strand 5
B
40 43parallel
Strand 6
B
73 80parallel
Strand 7
B
104 109parallel
Strand 8
B
172 175parallel
Strand 9
B
192 196parallel
Strand 10
B
228 236parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 150first strand
Strand 2
B
156 159anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il