Analysis of interatomic Contacts of Structural Units in PDB entry:
6KEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KEV entry

There is 1 chain in PDB entry 6KEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6KEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
42 45Right-handed 310
Helix 3
AA3
A
48 56Right-handed alpha
Helix 4
AA4
A
61 65Right-handed 310
Helix 5
AA5
A
66 79Right-handed alpha
Helix 6
AA6
A
117 122Right-handed alpha
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
153 171Right-handed alpha
Helix 9
AA9
A
172 178Right-handed 310
Helix 10
AB1
A
265 275Right-handed alpha
Helix 11
AB2
A
285 293Right-handed alpha
Helix 12
AB3
A
302 323Right-handed alpha
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There are 3 sheets in PDB entry 6KEV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
106 111parallel
Strand 3
A
8 13parallel
Strand 4
A
126 132parallel
Strand 5
A
180 186parallel
Strand 6
A
199 206anti-parallel
Strand 7
A
252 260anti-parallel
Strand 8
A
241 249anti-parallel
Strand 9
A
224 226anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 88first strand
Strand 2
A
95 101anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
276 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il