Analysis of interatomic Contacts of Structural Units in PDB entry:
6KEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KEW entry

There are 2 chains in PDB entry 6KEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5ARG 346
B
 GLU 5ALA 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6KEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 31Right-handed alpha
Helix 2
AA2
A
58 61Right-handed 310
Helix 3
AA3
A
64 72Right-handed alpha
Helix 4
AA4
A
77 81Right-handed 310
Helix 5
AA5
A
82 95Right-handed alpha
Helix 6
AA6
A
133 138Right-handed alpha
Helix 7
AA7
A
149 160Right-handed alpha
Helix 8
AA8
A
161 165Right-handed 310
Helix 9
AA9
A
168 187Right-handed alpha
Helix 10
AB1
A
188 194Right-handed 310
Helix 11
AB2
A
281 291Right-handed alpha
Helix 12
AB3
A
301 309Right-handed alpha
Helix 13
AB4
A
318 345Right-handed alpha
Helix 14
AB5
B
20 31Right-handed alpha
Helix 15
AB6
B
58 61Right-handed 310
Helix 16
AB7
B
64 72Right-handed alpha
Helix 17
AB8
B
77 81Right-handed 310
Helix 18
AB9
B
82 95Right-handed alpha
Helix 19
AC1
B
133 140Right-handed alpha
Helix 20
AC2
B
149 160Right-handed alpha
Helix 21
AC3
B
161 167Right-handed 310
Helix 22
AC4
B
168 187Right-handed alpha
Helix 23
AC5
B
188 194Right-handed 310
Helix 24
AC6
B
281 291Right-handed alpha
Helix 25
AC7
B
301 309Right-handed alpha
Helix 26
AC8
B
318 347Right-handed alpha
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There are 6 sheets in PDB entry 6KEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
52 56anti-parallel
Strand 3
A
122 127parallel
Strand 4
A
7 12parallel
Strand 5
A
142 148parallel
Strand 6
A
196 202parallel
Strand 7
A
215 222anti-parallel
Strand 8
A
268 277anti-parallel
Strand 9
A
256 265anti-parallel
Strand 10
A
240 242anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 104first strand
Strand 2
A
111 117anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
292 293anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
52 56anti-parallel
Strand 3
B
122 127parallel
Strand 4
B
7 12parallel
Strand 5
B
142 148parallel
Strand 6
B
196 202parallel
Strand 7
B
215 222anti-parallel
Strand 8
B
268 277anti-parallel
Strand 9
B
256 265anti-parallel
Strand 10
B
240 242anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 105first strand
Strand 2
B
110 117anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 233first strand
Strand 2
B
292 293anti-parallel
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