Analysis of interatomic Contacts of Structural Units in PDB entry:
6KFN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KFN entry

There is 1 chain in PDB entry 6KFN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 36ALA 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 6KFN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 54Right-handed alpha
Helix 2
AA2
A
176 180Right-handed 310
Helix 3
AA3
A
188 192Right-handed 310
Helix 4
AA4
A
241 245Right-handed 310
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There are 3 sheets in PDB entry 6KFN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
59 63parallel
Strand 3
A
85 89parallel
Strand 4
A
116 119parallel
Strand 5
A
139 141parallel
Strand 6
A
163 165parallel
Strand 7
A
203 205parallel
Strand 8
A
228 230parallel
Strand 9
A
257 259parallel
Strand 10
A
288 291parallel
Strand 11
A
312 316parallel
Strand 12
A
330 332parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
97 99parallel
Strand 3
A
122 126parallel
Strand 4
A
144 148parallel
Strand 5
A
168 170parallel
Strand 6
A
208 209parallel
Strand 7
A
233 235parallel
Strand 8
A
262 264parallel
Strand 9
A
294 296parallel
Strand 10
A
319 321parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 75first strand
Strand 2
A
107 111parallel
Strand 3
A
128 133parallel
Strand 4
A
153 156parallel
Strand 5
A
183 185parallel
Strand 6
A
218 220parallel
Strand 7
A
247 251parallel
Strand 8
A
273 277parallel
Strand 9
A
303 307parallel
Strand 10
A
327 328parallel
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