Analysis of interatomic Contacts of Structural Units in PDB entry:
6KFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KFS entry

There is 1 chain in PDB entry 6KFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1LEU 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6KFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
18 31Right-handed alpha
Helix 3
AA3
A
47 49Right-handed 310
Helix 4
AA4
A
50 62Right-handed alpha
Helix 5
AA5
A
69 73Right-handed 310
Helix 6
AA6
A
76 87Right-handed alpha
Helix 7
AA7
A
125 140Right-handed alpha
Helix 8
AA8
A
155 166Right-handed alpha
Helix 9
AA9
A
168 175Right-handed alpha
Helix 10
AB1
A
177 202Right-handed alpha
Helix 11
AB2
A
203 205Right-handed 310
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There are 2 sheets in PDB entry 6KFS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
228 237anti-parallel
Strand 3
A
211 220anti-parallel
Strand 4
A
101 103parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
39 43parallel
Strand 3
A
94 98parallel
Strand 4
A
211 220parallel
Strand 5
A
228 237anti-parallel
Strand 6
A
243 246anti-parallel
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