Analysis of interatomic Contacts of Structural Units in PDB entry:
6KG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KG6 entry

There are 3 chains in PDB entry 6KG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 3LEU 381
C
 SER -1LEU 73
G
 MET 1ASN 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6KG6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
7 25Right-handed alpha
Helix 2
AA2
B
26 30Right-handed 310
Helix 3
AA3
B
32 45Right-handed alpha
Helix 4
AA4
B
46 48Right-handed 310
Helix 5
AA5
B
53 64Right-handed alpha
Helix 6
AA6
B
73 97Right-handed alpha
Helix 7
AA7
B
106 111Right-handed alpha
Helix 8
AA8
B
137 141Right-handed 310
Helix 9
AA9
B
173 184Right-handed alpha
Helix 10
AB1
B
186 189Right-handed 310
Helix 11
AB2
B
204 222Right-handed alpha
Helix 12
AB3
B
242 246Right-handed 310
Helix 13
AB4
B
259 266Right-handed alpha
Helix 14
AB5
B
267 274Right-handed alpha
Helix 15
AB6
B
275 290Right-handed alpha
Helix 16
AB7
B
292 305Right-handed alpha
Helix 17
AB8
B
315 319Right-handed 310
Helix 18
AB9
B
334 353Right-handed alpha
Helix 19
AC1
B
357 380Right-handed alpha
Helix 20
AC2
C
22 35Right-handed alpha
Helix 21
AC3
C
37 41Right-handed 310
Helix 22
AC4
C
56 60Right-handed 310
Helix 23
AC5
G
5 18Right-handed alpha
Helix 24
AC6
G
100 114Right-handed alpha
Helix 25
AC7
G
122 132Right-handed alpha
Helix 26
AC8
G
132 148Right-handed alpha
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There are 4 sheets in PDB entry 6KG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
324 332anti-parallel
Strand 3
B
118 127anti-parallel
Strand 4
B
227 237anti-parallel
Strand 5
B
249 251anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
158 161anti-parallel
Strand 3
B
150 153anti-parallel
Strand 4
B
132 135parallel
Strand 5
B
191 193anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 17first strand
Strand 2
C
1 7anti-parallel
Strand 3
C
66 70parallel
Strand 4
C
42 45anti-parallel
Strand 5
C
48 49anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
23 27first strand
Strand 2
G
34 40anti-parallel
Strand 3
G
51 57anti-parallel
Strand 4
G
68 71anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il