Analysis of interatomic Contacts of Structural Units in PDB entry:
6KHT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KHT entry

There are 3 chains in PDB entry 6KHT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4HIS 485
B
 SER 4HIS 485
C
 SER 4HIS 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6KHT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 31Right-handed 310
Helix 2
AA2
A
34 40Right-handed alpha
Helix 3
AA3
A
57 72Right-handed alpha
Helix 4
AA4
A
82 87Right-handed alpha
Helix 5
AA5
A
97 114Right-handed alpha
Helix 6
AA6
A
128 136Right-handed alpha
Helix 7
AA7
A
137 139Right-handed 310
Helix 8
AA8
A
140 160Right-handed alpha
Helix 9
AA9
A
171 181Right-handed alpha
Helix 10
AB1
A
203 227Right-handed alpha
Helix 11
AB2
A
227 232Right-handed alpha
Helix 12
AB3
A
251 264Right-handed alpha
Helix 13
AB4
A
266 276Right-handed alpha
Helix 14
AB5
A
280 287Right-handed alpha
Helix 15
AB6
A
297 302Right-handed alpha
Helix 16
AB7
A
360 372Right-handed alpha
Helix 17
AB8
A
402 424Right-handed alpha
Helix 18
AB9
A
440 444Right-handed 310
Helix 19
AC1
A
464 476Right-handed alpha
Helix 20
AC2
B
18 23Right-handed alpha
Helix 21
AC3
B
34 40Right-handed alpha
Helix 22
AC4
B
57 72Right-handed alpha
Helix 23
AC5
B
82 87Right-handed alpha
Helix 24
AC6
B
97 114Right-handed alpha
Helix 25
AC7
B
128 136Right-handed alpha
Helix 26
AC8
B
137 139Right-handed 310
Helix 27
AC9
B
140 160Right-handed alpha
Helix 28
AD1
B
171 181Right-handed alpha
Helix 29
AD2
B
203 227Right-handed alpha
Helix 30
AD3
B
227 232Right-handed alpha
Helix 31
AD4
B
256 262Right-handed alpha
Helix 32
AD5
B
266 274Right-handed alpha
Helix 33
AD6
B
280 285Right-handed alpha
Helix 34
AD7
B
360 372Right-handed alpha
Helix 35
AD8
B
402 423Right-handed alpha
Helix 36
AD9
B
440 444Right-handed 310
Helix 37
AE1
B
464 476Right-handed alpha
Helix 38
AE2
C
18 23Right-handed alpha
Helix 39
AE3
C
27 31Right-handed 310
Helix 40
AE4
C
35 40Right-handed alpha
Helix 41
AE5
C
57 72Right-handed alpha
Helix 42
AE6
C
82 87Right-handed alpha
Helix 43
AE7
C
97 114Right-handed alpha
Helix 44
AE8
C
128 136Right-handed alpha
Helix 45
AE9
C
137 139Right-handed 310
Helix 46
AF1
C
140 160Right-handed alpha
Helix 47
AF2
C
171 181Right-handed alpha
Helix 48
AF3
C
203 227Right-handed alpha
Helix 49
AF4
C
227 232Right-handed alpha
Helix 50
AF5
C
251 255Right-handed 310
Helix 51
AF6
C
256 264Right-handed alpha
Helix 52
AF7
C
266 276Right-handed alpha
Helix 53
AF8
C
280 285Right-handed alpha
Helix 54
AF9
C
297 302Right-handed alpha
Helix 55
AG1
C
360 372Right-handed alpha
Helix 56
AG2
C
402 424Right-handed alpha
Helix 57
AG3
C
440 444Right-handed 310
Helix 58
AG4
C
464 476Right-handed alpha
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There are 9 sheets in PDB entry 6KHT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 17first strand
Strand 2
A
76 80parallel
Strand 3
A
117 123parallel
Strand 4
A
165 170parallel
Strand 5
A
234 240parallel
Strand 6
A
309 313parallel
Strand 7
A
379 385parallel
Strand 8
A
427 433parallel
Strand 9
A
12 17parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 246first strand
Strand 2
A
317 321parallel
Strand 3
A
337 339anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 455first strand
Strand 2
A
460 463anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
76 80parallel
Strand 3
B
117 123parallel
Strand 4
B
165 170parallel
Strand 5
B
234 239parallel
Strand 6
B
309 313parallel
Strand 7
B
379 383parallel
Strand 8
B
427 433parallel
Strand 9
B
12 16parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 246first strand
Strand 2
B
317 321parallel
Strand 3
B
337 339anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 455first strand
Strand 2
B
460 463anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
76 80parallel
Strand 3
C
117 123parallel
Strand 4
C
165 170parallel
Strand 5
C
234 239parallel
Strand 6
C
309 313parallel
Strand 7
C
379 383parallel
Strand 8
C
427 433parallel
Strand 9
C
12 16parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
243 246first strand
Strand 2
C
317 320parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
452 455first strand
Strand 2
C
460 463anti-parallel
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