Analysis of interatomic Contacts of Structural Units in PDB entry:
6KI1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KI1 entry

There are 2 chains in PDB entry 6KI1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 2GLY 393
B
 GLN 2GLY 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 6KI1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 38Right-handed alpha
Helix 2
AA2
A
41 59Right-handed alpha
Helix 3
AA3
A
71 87Right-handed alpha
Helix 4
AA4
A
90 112Right-handed alpha
Helix 5
AA5
A
114 120Right-handed 310
Helix 6
AA6
A
122 147Right-handed alpha
Helix 7
AA7
A
156 161Right-handed alpha
Helix 8
AA8
A
163 167Right-handed 310
Helix 9
AA9
A
170 187Right-handed alpha
Helix 10
AB1
A
196 208Right-handed alpha
Helix 11
AB2
A
209 211Right-handed 310
Helix 12
AB3
A
240 269Right-handed alpha
Helix 13
AB4
A
275 292Right-handed alpha
Helix 14
AB5
A
303 311Right-handed alpha
Helix 15
AB6
A
315 338Right-handed alpha
Helix 16
AB7
A
341 357Right-handed alpha
Helix 17
AB8
A
358 363Right-handed alpha
Helix 18
AB9
A
369 391Right-handed alpha
Helix 19
AC1
B
11 38Right-handed alpha
Helix 20
AC2
B
40 58Right-handed alpha
Helix 21
AC3
B
71 87Right-handed alpha
Helix 22
AC4
B
90 112Right-handed alpha
Helix 23
AC5
B
114 119Right-handed 310
Helix 24
AC6
B
122 146Right-handed alpha
Helix 25
AC7
B
161 168Right-handed alpha
Helix 26
AC8
B
170 187Right-handed alpha
Helix 27
AC9
B
188 194Right-handed 310
Helix 28
AD1
B
196 208Right-handed alpha
Helix 29
AD2
B
209 211Right-handed 310
Helix 30
AD3
B
240 271Right-handed alpha
Helix 31
AD4
B
275 293Right-handed alpha
Helix 32
AD5
B
303 310Right-handed alpha
Helix 33
AD6
B
316 338Right-handed alpha
Helix 34
AD7
B
341 357Right-handed alpha
Helix 35
AD8
B
369 393Right-handed alpha
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There are 2 sheets in PDB entry 6KI1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
299 300anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
299 300anti-parallel
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