Analysis of interatomic Contacts of Structural Units in PDB entry:
6KI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KI2 entry

There are 2 chains in PDB entry 6KI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 402GLY 547
B
 SER 402GLY 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6KI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
421 425Right-handed 310
Helix 2
AA2
A
428 438Right-handed alpha
Helix 3
AA3
A
454 467Right-handed alpha
Helix 4
AA4
A
483 501Right-handed alpha
Helix 5
AA5
A
510 520Right-handed alpha
Helix 6
AA6
A
521 525Right-handed 310
Helix 7
AA7
A
527 529Right-handed 310
Helix 8
AA8
A
534 545Right-handed alpha
Helix 9
AA9
B
421 425Right-handed 310
Helix 10
AB1
B
428 438Right-handed alpha
Helix 11
AB2
B
454 467Right-handed alpha
Helix 12
AB3
B
483 501Right-handed alpha
Helix 13
AB4
B
510 520Right-handed alpha
Helix 14
AB5
B
521 525Right-handed 310
Helix 15
AB6
B
527 529Right-handed 310
Helix 16
AB7
B
534 545Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6KI2.

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
531 532first strand
Strand 2
A
503 507parallel
Strand 3
A
471 478parallel
Strand 4
B
442 448parallel
Strand 5
A
405 411anti-parallel
Strand 6
A
414 419anti-parallel
Strand 7
B
414 419anti-parallel
Strand 8
B
405 411anti-parallel
Strand 9
A
442 448anti-parallel
Strand 10
B
471 478parallel
Strand 11
B
503 507parallel
Strand 12
B
531 532parallel
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