Analysis of interatomic Contacts of Structural Units in PDB entry:
6KIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KIE entry

There is 1 chain in PDB entry 6KIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7PHE 1061
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6KIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 27Right-handed alpha
Helix 2
AA2
A
35 39Right-handed 310
Helix 3
AA3
A
60 80Right-handed alpha
Helix 4
AA4
A
95 112Right-handed alpha
Helix 5
AA5
A
156 162Right-handed alpha
Helix 6
AA6
A
163 165Right-handed 310
Helix 7
AA7
A
167 172Right-handed alpha
Helix 8
AA8
A
173 175Right-handed 310
Helix 9
AA9
A
176 178Right-handed 310
Helix 10
AB1
A
179 194Right-handed alpha
Helix 11
AB2
A
200 204Right-handed 310
Helix 12
AB3
A
211 228Right-handed alpha
Helix 13
AB4
A
249 253Right-handed 310
Helix 14
AB5
A
295 302Right-handed 310
Helix 15
AB6
A
328 337Right-handed alpha
Helix 16
AB7
A
355 357Right-handed 310
Helix 17
AB8
A
396 409Right-handed alpha
Helix 18
AB9
A
409 415Right-handed alpha
Helix 19
AC1
A
440 449Right-handed alpha
Helix 20
AC2
A
456 474Right-handed alpha
Helix 21
AC3
A
486 501Right-handed alpha
Helix 22
AC4
A
536 550Right-handed alpha
Helix 23
AC5
A
554 568Right-handed alpha
Helix 24
AC6
A
600 605Right-handed alpha
Helix 25
AC7
A
606 610Right-handed 310
Helix 26
AC8
A
626 630Right-handed 310
Helix 27
AC9
A
631 640Right-handed alpha
Helix 28
AD1
A
651 666Right-handed alpha
Helix 29
AD2
A
676 678Right-handed 310
Helix 30
AD3
A
680 693Right-handed alpha
Helix 31
AD4
A
696 700Right-handed 310
Helix 32
AD5
A
726 734Right-handed alpha
Helix 33
AD6
A
735 745Right-handed alpha
Helix 34
AD7
A
756 779Right-handed alpha
Helix 35
AD8
A
791 814Right-handed alpha
Helix 36
AD9
A
816 825Right-handed alpha
Helix 37
AE1
A
825 839Right-handed alpha
Helix 38
AE2
A
844 860Right-handed alpha
Helix 39
AE3
A
863 874Right-handed alpha
Helix 40
AE4
A
879 883Right-handed 310
Helix 41
AE5
A
892 912Right-handed alpha
Helix 42
AE6
A
945 961Right-handed alpha
Helix 43
AE7
A
968 978Right-handed alpha
Helix 44
AE8
A
979 983Right-handed 310
Helix 45
AE9
A
988 1001Right-handed alpha
Helix 46
AF1
A
1004 1009Right-handed 310
Helix 47
AF2
A
1015 1022Right-handed alpha
Helix 48
AF3
A
1023 1031Right-handed alpha
Helix 49
AF4
A
1045 1052Right-handed alpha
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There are 8 sheets in PDB entry 6KIE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 85first strand
Strand 2
A
45 49parallel
Strand 3
A
670 674parallel
Strand 4
A
703 707parallel
Strand 5
A
551 552parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
205 206parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
231 241anti-parallel
Strand 3
A
523 533anti-parallel
Strand 4
A
570 571anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 353first strand
Strand 2
A
312 317anti-parallel
Strand 3
A
323 327anti-parallel
Strand 4
A
287 293parallel
Strand 5
A
261 272anti-parallel
Strand 6
A
504 510anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 353first strand
Strand 2
A
312 317anti-parallel
Strand 3
A
323 327anti-parallel
Strand 4
A
287 293parallel
Strand 5
A
389 391parallel
Strand 6
A
304 307anti-parallel
Strand 7
A
371 376parallel
Strand 8
A
361 363anti-parallel
Strand 9
A
261 272anti-parallel
Strand 10
A
504 510anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 433first strand
Strand 2
A
476 477anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 575first strand
Strand 2
A
590 591anti-parallel
Strand 3
A
581 582anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1035 1039first strand
Strand 2
A
935 939parallel
Strand 3
A
1058 1060anti-parallel
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