Analysis of interatomic Contacts of Structural Units in PDB entry:
6KIQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KIQ entry

There are 3 chains in PDB entry 6KIQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
a
 ARG 1002SER 1413
b
 ARG 2ASP 437
M
 MET 3095GLU 3224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6KIQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
a
1010 1029Right-handed alpha
Helix 2
AA2
a
1046 1055Right-handed alpha
Helix 3
AA3
a
1062 1064Right-handed 310
Helix 4
AA4
a
1076 1082Right-handed alpha
Helix 5
AA5
a
1082 1101Right-handed alpha
Helix 6
AA6
a
1121 1135Right-handed alpha
Helix 7
AA7
a
1156 1170Right-handed alpha
Helix 8
AA8
a
1179 1190Right-handed alpha
Helix 9
AA9
a
1197 1217Right-handed alpha
Helix 10
AB1
a
1225 1233Right-handed alpha
Helix 11
AB2
a
1261 1271Right-handed alpha
Helix 12
AB3
a
1280 1284Right-handed 310
Helix 13
AB4
a
1298 1311Right-handed alpha
Helix 14
AB5
a
1358 1376Right-handed alpha
Helix 15
AB6
a
1379 1384Right-handed alpha
Helix 16
AB7
a
1388 1404Right-handed alpha
Helix 17
AB8
a
1404 1409Right-handed alpha
Helix 18
AB9
b
10 27Right-handed alpha
Helix 19
AC1
b
40 47Right-handed alpha
Helix 20
AC2
b
48 52Right-handed 310
Helix 21
AC3
b
74 79Right-handed alpha
Helix 22
AC4
b
88 90Right-handed 310
Helix 23
AC5
b
103 107Right-handed 310
Helix 24
AC6
b
110 115Right-handed alpha
Helix 25
AC7
b
115 127Right-handed alpha
Helix 26
AC8
b
143 148Right-handed alpha
Helix 27
AC9
b
148 161Right-handed alpha
Helix 28
AD1
b
182 195Right-handed alpha
Helix 29
AD2
b
205 215Right-handed alpha
Helix 30
AD3
b
223 238Right-handed alpha
Helix 31
AD4
b
239 244Right-handed 310
Helix 32
AD5
b
251 258Right-handed alpha
Helix 33
AD6
b
277 281Right-handed 310
Helix 34
AD7
b
288 296Right-handed alpha
Helix 35
AD8
b
306 310Right-handed 310
Helix 36
AD9
b
324 339Right-handed alpha
Helix 37
AE1
b
340 343Right-handed 310
Helix 38
AE2
b
381 383Right-handed 310
Helix 39
AE3
b
384 400Right-handed alpha
Helix 40
AE4
b
405 410Right-handed alpha
Helix 41
AE5
b
415 435Right-handed alpha
Helix 42
AE6
M
3103 3114Right-handed alpha
Helix 43
AE7
M
3116 3126Right-handed alpha
Helix 44
AE8
M
3130 3145Right-handed alpha
Helix 45
AE9
M
3150 3159Right-handed alpha
Helix 46
AF1
M
3161 3170Right-handed alpha
Helix 47
AF2
M
3179 3189Right-handed alpha
Helix 48
AF3
M
3195 3203Right-handed alpha
Helix 49
AF4
M
3205 3219Right-handed alpha
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There are 5 sheets in PDB entry 6KIQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
1066 1068first strand
Strand 2
a
1040 1043parallel
Strand 3
a
1006 1009parallel
Strand 4
a
1108 1111parallel
Strand 5
a
1139 1145parallel
Strand 6
a
1174 1178parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
1242 1243first strand
Strand 2
a
1353 1355anti-parallel
Strand 3
a
1286 1289anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
1328 1330first strand
Strand 2
a
1292 1295parallel
Strand 3
a
1347 1350anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
92 94first strand
Strand 2
b
67 69parallel
Strand 3
b
3 9parallel
Strand 4
b
132 139parallel
Strand 5
b
165 170parallel
Strand 6
b
200 202parallel
Strand 7
b
267 271parallel
Strand 8
b
375 379anti-parallel
Strand 9
b
318 319anti-parallel
Strand 10
b
354 355parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
55 56first strand
Strand 2
b
60 61anti-parallel
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