Analysis of interatomic Contacts of Structural Units in PDB entry:
6KJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KJP entry

There is 1 chain in PDB entry 6KJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7LEU 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6KJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 28Right-handed alpha
Helix 2
AA2
A
74 89Right-handed alpha
Helix 3
AA3
A
97 102Right-handed alpha
Helix 4
AA4
A
103 106Right-handed 310
Helix 5
AA5
A
109 113Right-handed 310
Helix 6
AA6
A
114 120Right-handed alpha
Helix 7
AA7
A
141 150Right-handed alpha
Helix 8
AA8
A
165 181Right-handed alpha
Helix 9
AA9
A
183 192Right-handed alpha
Helix 10
AB1
A
206 213Right-handed 310
Helix 11
AB2
A
217 225Right-handed alpha
Helix 12
AB3
A
243 256Right-handed alpha
Helix 13
AB4
A
267 275Right-handed alpha
Helix 14
AB5
A
331 333Right-handed 310
Helix 15
AB6
A
347 352Right-handed alpha
Helix 16
AB7
A
352 360Right-handed alpha
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There are 4 sheets in PDB entry 6KJP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
43 53anti-parallel
Strand 3
A
33 40anti-parallel
Strand 4
A
335 340anti-parallel
Strand 5
A
325 330anti-parallel
Strand 6
A
317 321anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
241 242anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
285 287parallel
Strand 3
A
290 291anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
263 264anti-parallel
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