Analysis of interatomic Contacts of Structural Units in PDB entry:
6KK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KK9 entry

There are 4 chains in PDB entry 6KK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
O
 ASN 28LEU 214
B
 ASN 28THR 217
C
 ASN 28GLU 215
D
 ASN 28TYR 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 6KK9

There are 8 sheets in PDB entry 6KK9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
30 34first strand
Strand 2
O
38 44anti-parallel
Strand 3
O
52 58anti-parallel
Strand 4
O
61 67anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
74 79first strand
Strand 2
O
85 90anti-parallel
Strand 3
O
96 102anti-parallel
Strand 4
O
109 116anti-parallel
Strand 5
O
121 126anti-parallel
Strand 6
O
132 138anti-parallel
Strand 7
O
144 149anti-parallel
Strand 8
O
155 161anti-parallel
Strand 9
O
167 172anti-parallel
Strand 10
O
178 184anti-parallel
Strand 11
O
190 194anti-parallel
Strand 12
O
205 207anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
38 44anti-parallel
Strand 3
B
52 58anti-parallel
Strand 4
B
61 67anti-parallel
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There are 13 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
85 90anti-parallel
Strand 3
B
96 102anti-parallel
Strand 4
B
109 116anti-parallel
Strand 5
B
121 126anti-parallel
Strand 6
B
132 138anti-parallel
Strand 7
B
144 149anti-parallel
Strand 8
B
155 161anti-parallel
Strand 9
B
167 172anti-parallel
Strand 10
B
178 184anti-parallel
Strand 11
B
190 195anti-parallel
Strand 12
B
201 207anti-parallel
Strand 13
B
213 215anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 33first strand
Strand 2
C
39 44anti-parallel
Strand 3
C
52 58anti-parallel
Strand 4
C
61 67anti-parallel
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There are 13 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 79first strand
Strand 2
C
85 90anti-parallel
Strand 3
C
96 102anti-parallel
Strand 4
C
109 116anti-parallel
Strand 5
C
121 126anti-parallel
Strand 6
C
132 138anti-parallel
Strand 7
C
144 149anti-parallel
Strand 8
C
155 161anti-parallel
Strand 9
C
167 172anti-parallel
Strand 10
C
178 184anti-parallel
Strand 11
C
190 195anti-parallel
Strand 12
C
201 207anti-parallel
Strand 13
C
213 214anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 34first strand
Strand 2
D
38 44anti-parallel
Strand 3
D
52 58anti-parallel
Strand 4
D
61 67anti-parallel
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There are 13 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
74 79first strand
Strand 2
D
85 90anti-parallel
Strand 3
D
96 102anti-parallel
Strand 4
D
109 116anti-parallel
Strand 5
D
121 126anti-parallel
Strand 6
D
132 138anti-parallel
Strand 7
D
144 149anti-parallel
Strand 8
D
155 161anti-parallel
Strand 9
D
167 172anti-parallel
Strand 10
D
178 184anti-parallel
Strand 11
D
190 195anti-parallel
Strand 12
D
201 207anti-parallel
Strand 13
D
213 216anti-parallel
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