Analysis of interatomic Contacts of Structural Units in PDB entry:
6KKH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6KKH entry

There are 12 chains in PDB entry 6KKH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 3	LEU 341
B	LEU 3	PHE 347
C	MET 1	PHE 347
D	MET 1	PHE 347
E	MET 1	PHE 347
F	MET 1	PHE 347
G	PRO 4	ALA 335
H	TYR 8	ALA 335
I	MET 1	TYR 345
J	MET 1	PHE 347
K	MET 1	GLY 346
L	MET 1	PHE 347

There are185 helices in PDB entry 6KKH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	8	Right-handed alpha
Helix 2	AA2	A	37	43	Right-handed alpha
Helix 3	AA3	A	43	49	Right-handed alpha
Helix 4	AA4	A	63	65	Right-handed 310
Helix 5	AA5	A	66	81	Right-handed alpha
Helix 6	AA6	A	99	112	Right-handed alpha
Helix 7	AA7	A	113	115	Right-handed 310
Helix 8	AA8	A	125	143	Right-handed alpha
Helix 9	AA9	A	157	163	Right-handed alpha
Helix 10	AB1	A	163	169	Right-handed alpha
Helix 11	AB2	A	180	189	Right-handed alpha
Helix 12	AB3	A	223	237	Right-handed alpha
Helix 13	AB4	A	251	266	Right-handed alpha
Helix 14	AB5	A	276	285	Right-handed alpha
Helix 15	AB6	A	288	302	Right-handed alpha
Helix 16	AB7	A	317	335	Right-handed alpha
Helix 17	AB8	B	4	8	Right-handed alpha
Helix 18	AB9	B	37	43	Right-handed alpha
Helix 19	AC1	B	43	49	Right-handed alpha
Helix 20	AC2	B	63	65	Right-handed 310
Helix 21	AC3	B	66	81	Right-handed alpha
Helix 22	AC4	B	99	112	Right-handed alpha
Helix 23	AC5	B	125	143	Right-handed alpha
Helix 24	AC6	B	157	163	Right-handed alpha
Helix 25	AC7	B	163	169	Right-handed alpha
Helix 26	AC8	B	180	189	Right-handed alpha
Helix 27	AC9	B	223	237	Right-handed alpha
Helix 28	AD1	B	251	266	Right-handed alpha
Helix 29	AD2	B	276	285	Right-handed alpha
Helix 30	AD3	B	288	302	Right-handed alpha
Helix 31	AD4	B	318	335	Right-handed alpha
Helix 32	AD5	B	338	346	Right-handed alpha
Helix 33	AD6	C	3	8	Right-handed alpha
Helix 34	AD7	C	37	42	Right-handed alpha
Helix 35	AD8	C	43	51	Right-handed alpha
Helix 36	AD9	C	63	65	Right-handed 310
Helix 37	AE1	C	66	80	Right-handed alpha
Helix 38	AE2	C	99	112	Right-handed alpha
Helix 39	AE3	C	125	143	Right-handed alpha
Helix 40	AE4	C	157	163	Right-handed alpha
Helix 41	AE5	C	163	169	Right-handed alpha
Helix 42	AE6	C	180	189	Right-handed alpha
Helix 43	AE7	C	223	237	Right-handed alpha
Helix 44	AE8	C	251	266	Right-handed alpha
Helix 45	AE9	C	276	286	Right-handed alpha
Helix 46	AF1	C	288	302	Right-handed alpha
Helix 47	AF2	C	317	336	Right-handed alpha
Helix 48	AF3	C	338	346	Right-handed alpha
Helix 49	AF4	D	3	8	Right-handed alpha
Helix 50	AF5	D	37	48	Right-handed alpha
Helix 51	AF6	D	49	51	Right-handed 310
Helix 52	AF7	D	63	65	Right-handed 310
Helix 53	AF8	D	66	81	Right-handed alpha
Helix 54	AF9	D	99	112	Right-handed alpha
Helix 55	AG1	D	113	115	Right-handed 310
Helix 56	AG2	D	125	143	Right-handed alpha
Helix 57	AG3	D	157	163	Right-handed alpha
Helix 58	AG4	D	163	169	Right-handed alpha
Helix 59	AG5	D	180	189	Right-handed alpha
Helix 60	AG6	D	223	237	Right-handed alpha
Helix 61	AG7	D	251	266	Right-handed alpha
Helix 62	AG8	D	276	285	Right-handed alpha
Helix 63	AG9	D	317	338	Right-handed alpha
Helix 64	AH1	D	338	346	Right-handed alpha
Helix 65	AH2	E	3	8	Right-handed alpha
Helix 66	AH3	E	37	49	Right-handed alpha
Helix 67	AH4	E	63	65	Right-handed 310
Helix 68	AH5	E	66	81	Right-handed alpha
Helix 69	AH6	E	99	112	Right-handed alpha
Helix 70	AH7	E	113	115	Right-handed 310
Helix 71	AH8	E	125	143	Right-handed alpha
Helix 72	AH9	E	157	163	Right-handed alpha
Helix 73	AI1	E	163	169	Right-handed alpha
Helix 74	AI2	E	180	188	Right-handed alpha
Helix 75	AI3	E	223	237	Right-handed alpha
Helix 76	AI4	E	251	266	Right-handed alpha
Helix 77	AI5	E	276	285	Right-handed alpha
Helix 78	AI6	E	288	302	Right-handed alpha
Helix 79	AI7	E	317	336	Right-handed alpha
Helix 80	AI8	E	338	346	Right-handed alpha
Helix 81	AI9	F	3	8	Right-handed alpha
Helix 82	AJ1	F	37	51	Right-handed alpha
Helix 83	AJ2	F	63	65	Right-handed 310
Helix 84	AJ3	F	66	81	Right-handed alpha
Helix 85	AJ4	F	99	112	Right-handed alpha
Helix 86	AJ5	F	125	143	Right-handed alpha
Helix 87	AJ6	F	157	163	Right-handed alpha
Helix 88	AJ7	F	163	169	Right-handed alpha
Helix 89	AJ8	F	180	189	Right-handed alpha
Helix 90	AJ9	F	223	237	Right-handed alpha
Helix 91	AK1	F	251	266	Right-handed alpha
Helix 92	AK2	F	276	286	Right-handed alpha
Helix 93	AK3	F	288	302	Right-handed alpha
Helix 94	AK4	F	317	336	Right-handed alpha
Helix 95	AK5	F	338	346	Right-handed alpha
Helix 96	AK6	G	37	51	Right-handed alpha
Helix 97	AK7	G	63	65	Right-handed 310
Helix 98	AK8	G	66	81	Right-handed alpha
Helix 99	AK9	G	99	112	Right-handed alpha
Helix 100	AL1	G	125	144	Right-handed alpha
Helix 101	AL2	G	157	163	Right-handed alpha
Helix 102	AL3	G	163	169	Right-handed alpha
Helix 103	AL4	G	180	189	Right-handed alpha
Helix 104	AL5	G	223	237	Right-handed alpha
Helix 105	AL6	G	251	266	Right-handed alpha
Helix 106	AL7	G	276	285	Right-handed alpha
Helix 107	AL8	G	288	302	Right-handed alpha
Helix 108	AL9	G	317	333	Right-handed alpha
Helix 109	AM1	H	37	43	Right-handed alpha
Helix 110	AM2	H	43	48	Right-handed alpha
Helix 111	AM3	H	49	51	Right-handed 310
Helix 112	AM4	H	63	65	Right-handed 310
Helix 113	AM5	H	66	81	Right-handed alpha
Helix 114	AM6	H	99	112	Right-handed alpha
Helix 115	AM7	H	113	115	Right-handed 310
Helix 116	AM8	H	125	143	Right-handed alpha
Helix 117	AM9	H	157	163	Right-handed alpha
Helix 118	AN1	H	163	169	Right-handed alpha
Helix 119	AN2	H	180	189	Right-handed alpha
Helix 120	AN3	H	223	237	Right-handed alpha
Helix 121	AN4	H	251	266	Right-handed alpha
Helix 122	AN5	H	276	285	Right-handed alpha
Helix 123	AN6	H	288	296	Right-handed alpha
Helix 124	AN7	H	317	332	Right-handed alpha
Helix 125	AN8	I	3	8	Right-handed alpha
Helix 126	AN9	I	37	51	Right-handed alpha
Helix 127	AO1	I	65	80	Right-handed alpha
Helix 128	AO2	I	99	112	Right-handed alpha
Helix 129	AO3	I	125	144	Right-handed alpha
Helix 130	AO4	I	157	163	Right-handed alpha
Helix 131	AO5	I	163	169	Right-handed alpha
Helix 132	AO6	I	180	189	Right-handed alpha
Helix 133	AO7	I	223	237	Right-handed alpha
Helix 134	AO8	I	251	265	Right-handed alpha
Helix 135	AO9	I	276	286	Right-handed alpha
Helix 136	AP1	I	288	301	Right-handed alpha
Helix 137	AP2	I	317	336	Right-handed alpha
Helix 138	AP3	I	339	345	Right-handed alpha
Helix 139	AP4	J	3	8	Right-handed alpha
Helix 140	AP5	J	37	48	Right-handed alpha
Helix 141	AP6	J	49	51	Right-handed 310
Helix 142	AP7	J	63	65	Right-handed 310
Helix 143	AP8	J	66	81	Right-handed alpha
Helix 144	AP9	J	99	112	Right-handed alpha
Helix 145	AQ1	J	125	143	Right-handed alpha
Helix 146	AQ2	J	157	163	Right-handed alpha
Helix 147	AQ3	J	163	169	Right-handed alpha
Helix 148	AQ4	J	180	189	Right-handed alpha
Helix 149	AQ5	J	223	237	Right-handed alpha
Helix 150	AQ6	J	251	266	Right-handed alpha
Helix 151	AQ7	J	276	285	Right-handed alpha
Helix 152	AQ8	J	288	302	Right-handed alpha
Helix 153	AQ9	J	317	338	Right-handed alpha
Helix 154	AR1	J	338	346	Right-handed alpha
Helix 155	AR2	K	3	8	Right-handed alpha
Helix 156	AR3	K	37	43	Right-handed alpha
Helix 157	AR4	K	43	48	Right-handed alpha
Helix 158	AR5	K	66	80	Right-handed alpha
Helix 159	AR6	K	99	110	Right-handed alpha
Helix 160	AR7	K	125	143	Right-handed alpha
Helix 161	AR8	K	157	163	Right-handed alpha
Helix 162	AR9	K	163	169	Right-handed alpha
Helix 163	AS1	K	180	189	Right-handed alpha
Helix 164	AS2	K	223	237	Right-handed alpha
Helix 165	AS3	K	251	266	Right-handed alpha
Helix 166	AS4	K	274	276	Right-handed 310
Helix 167	AS5	K	277	285	Right-handed alpha
Helix 168	AS6	K	317	338	Right-handed alpha
Helix 169	AS7	K	341	346	Right-handed alpha
Helix 170	AS8	L	3	8	Right-handed alpha
Helix 171	AS9	L	37	48	Right-handed alpha
Helix 172	AT1	L	49	51	Right-handed 310
Helix 173	AT2	L	63	65	Right-handed 310
Helix 174	AT3	L	66	80	Right-handed alpha
Helix 175	AT4	L	99	112	Right-handed alpha
Helix 176	AT5	L	125	143	Right-handed alpha
Helix 177	AT6	L	157	163	Right-handed alpha
Helix 178	AT7	L	163	170	Right-handed alpha
Helix 179	AT8	L	180	189	Right-handed alpha
Helix 180	AT9	L	223	237	Right-handed alpha
Helix 181	AU1	L	251	266	Right-handed alpha
Helix 182	AU2	L	276	285	Right-handed alpha
Helix 183	AU3	L	288	302	Right-handed alpha
Helix 184	AU4	L	317	336	Right-handed alpha
Helix 185	AU5	L	338	346	Right-handed alpha

There are 34 sheets in PDB entry 6KKH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	242	first strand
Strand 2	A	174	179	parallel
Strand 3	A	150	155	parallel
Strand 4	A	117	120	parallel
Strand 5	A	87	91	parallel
Strand 6	A	53	57	parallel
Strand 7	A	29	33	parallel
Strand 8	A	270	272	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	205	first strand
Strand 2	A	217	219	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	33	first strand
Strand 2	B	53	57	parallel
Strand 3	B	87	91	parallel
Strand 4	B	117	120	parallel
Strand 5	B	150	155	parallel
Strand 6	B	174	179	parallel
Strand 7	B	240	243	parallel
Strand 8	B	269	272	parallel
Strand 9	B	29	33	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	217	219	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	311	first strand
Strand 2	B	314	317	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	33	first strand
Strand 2	C	53	57	parallel
Strand 3	C	87	91	parallel
Strand 4	C	117	120	parallel
Strand 5	C	150	155	parallel
Strand 6	C	174	179	parallel
Strand 7	C	240	243	parallel
Strand 8	C	270	272	parallel
Strand 9	C	29	33	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	205	first strand
Strand 2	C	217	219	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	311	first strand
Strand 2	C	314	316	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	242	first strand
Strand 2	D	174	179	parallel
Strand 3	D	150	155	parallel
Strand 4	D	117	120	parallel
Strand 5	D	87	91	parallel
Strand 6	D	53	57	parallel
Strand 7	D	29	33	parallel
Strand 8	D	270	272	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	205	first strand
Strand 2	D	217	219	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	310	311	first strand
Strand 2	D	314	315	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	242	first strand
Strand 2	E	174	179	parallel
Strand 3	E	150	155	parallel
Strand 4	E	117	120	parallel
Strand 5	E	87	91	parallel
Strand 6	E	53	57	parallel
Strand 7	E	29	33	parallel
Strand 8	E	270	272	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	203	205	first strand
Strand 2	E	217	219	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	309	311	first strand
Strand 2	E	314	316	anti-parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	240	242	first strand
Strand 2	F	174	179	parallel
Strand 3	F	150	155	parallel
Strand 4	F	117	120	parallel
Strand 5	F	87	91	parallel
Strand 6	F	53	57	parallel
Strand 7	F	29	33	parallel
Strand 8	F	270	272	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	203	205	first strand
Strand 2	F	217	219	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	309	311	first strand
Strand 2	F	314	316	anti-parallel

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There are 9 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	33	first strand
Strand 2	G	53	57	parallel
Strand 3	G	87	91	parallel
Strand 4	G	117	120	parallel
Strand 5	G	150	155	parallel
Strand 6	G	174	179	parallel
Strand 7	G	240	243	parallel
Strand 8	G	269	272	parallel
Strand 9	G	29	33	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	203	205	first strand
Strand 2	G	217	219	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	240	242	first strand
Strand 2	H	174	179	parallel
Strand 3	H	150	155	parallel
Strand 4	H	117	120	parallel
Strand 5	H	87	91	parallel
Strand 6	H	53	57	parallel
Strand 7	H	29	33	parallel
Strand 8	H	270	272	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	203	205	first strand
Strand 2	H	217	219	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	87	91	first strand
Strand 2	I	53	57	parallel
Strand 3	I	29	33	parallel
Strand 4	I	270	272	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	117	120	first strand
Strand 2	I	150	155	parallel
Strand 3	I	174	179	parallel
Strand 4	I	240	243	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	203	205	first strand
Strand 2	I	217	219	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	309	311	first strand
Strand 2	I	314	316	anti-parallel

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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	33	first strand
Strand 2	J	53	57	parallel
Strand 3	J	87	91	parallel
Strand 4	J	117	120	parallel
Strand 5	J	150	155	parallel
Strand 6	J	174	179	parallel
Strand 7	J	240	245	parallel
Strand 8	J	269	272	parallel
Strand 9	J	29	33	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	203	205	first strand
Strand 2	J	217	219	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	309	311	first strand
Strand 2	J	314	316	anti-parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	240	242	first strand
Strand 2	K	174	179	parallel
Strand 3	K	150	155	parallel
Strand 4	K	117	120	parallel
Strand 5	K	87	91	parallel
Strand 6	K	53	57	parallel
Strand 7	K	29	33	parallel
Strand 8	K	270	272	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	203	205	first strand
Strand 2	K	217	219	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	309	311	first strand
Strand 2	K	314	316	anti-parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	240	242	first strand
Strand 2	L	174	179	parallel
Strand 3	L	150	155	parallel
Strand 4	L	117	120	parallel
Strand 5	L	87	91	parallel
Strand 6	L	53	57	parallel
Strand 7	L	29	33	parallel
Strand 8	L	270	272	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	203	205	first strand
Strand 2	L	217	219	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	309	311	first strand
Strand 2	L	314	316	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6KKH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6KKH