Analysis of interatomic Contacts of Structural Units in PDB entry:
6KKJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KKJ entry

There is 1 chain in PDB entry 6KKJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 11TRP 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6KKJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
12 31Right-handed alpha
Helix 2
AA2
B
32 34Right-handed 310
Helix 3
AA3
B
35 44Right-handed alpha
Helix 4
AA4
B
48 50Right-handed 310
Helix 5
AA5
B
51 64Right-handed alpha
Helix 6
AA6
B
64 72Right-handed alpha
Helix 7
AA7
B
76 98Right-handed alpha
Helix 8
AA8
B
100 126Right-handed alpha
Helix 9
AA9
B
137 152Right-handed alpha
Helix 10
AB1
B
152 165Right-handed alpha
Helix 11
AB2
B
165 185Right-handed alpha
Helix 12
AB3
B
204 208Right-handed alpha
Helix 13
AB4
B
210 229Right-handed alpha
Helix 14
AB5
B
231 239Right-handed alpha
Helix 15
AB6
B
243 268Right-handed alpha
Helix 16
AB7
B
272 290Right-handed alpha
Helix 17
AB8
B
297 326Right-handed alpha
Helix 18
AB9
B
330 360Right-handed alpha
Helix 19
AC1
B
361 363Right-handed 310
Helix 20
AC2
B
364 385Right-handed alpha
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There are no sheets in PDB entry 6KKJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il