Analysis of interatomic Contacts of Structural Units in PDB entry:
6KKK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KKK entry

There are 3 chains in PDB entry 6KKK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 8GLU 392
B
 ARG 8GLU 392
C
 ARG 8GLU 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6KKK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 31Right-handed alpha
Helix 2
AA2
A
31 43Right-handed alpha
Helix 3
AA3
A
46 72Right-handed alpha
Helix 4
AA4
A
77 97Right-handed alpha
Helix 5
AA5
A
100 129Right-handed alpha
Helix 6
AA6
A
133 152Right-handed alpha
Helix 7
AA7
A
152 188Right-handed alpha
Helix 8
AA8
A
198 200Right-handed 310
Helix 9
AA9
A
201 208Right-handed alpha
Helix 10
AB1
A
208 230Right-handed alpha
Helix 11
AB2
A
231 239Right-handed alpha
Helix 12
AB3
A
244 269Right-handed alpha
Helix 13
AB4
A
272 290Right-handed alpha
Helix 14
AB5
A
291 296Right-handed 310
Helix 15
AB6
A
297 327Right-handed alpha
Helix 16
AB7
A
330 360Right-handed alpha
Helix 17
AB8
A
361 363Right-handed 310
Helix 18
AB9
A
364 387Right-handed alpha
Helix 19
AC1
B
10 31Right-handed alpha
Helix 20
AC2
B
31 42Right-handed alpha
Helix 21
AC3
B
46 51Right-handed alpha
Helix 22
AC4
B
51 72Right-handed alpha
Helix 23
AC5
B
77 97Right-handed alpha
Helix 24
AC6
B
100 129Right-handed alpha
Helix 25
AC7
B
131 152Right-handed alpha
Helix 26
AC8
B
152 186Right-handed alpha
Helix 27
AC9
B
200 208Right-handed alpha
Helix 28
AD1
B
208 230Right-handed alpha
Helix 29
AD2
B
231 239Right-handed alpha
Helix 30
AD3
B
243 269Right-handed alpha
Helix 31
AD4
B
272 290Right-handed alpha
Helix 32
AD5
B
290 295Right-handed alpha
Helix 33
AD6
B
297 327Right-handed alpha
Helix 34
AD7
B
330 360Right-handed alpha
Helix 35
AD8
B
361 363Right-handed 310
Helix 36
AD9
B
364 387Right-handed alpha
Helix 37
AE1
C
10 31Right-handed alpha
Helix 38
AE2
C
31 44Right-handed alpha
Helix 39
AE3
C
46 51Right-handed alpha
Helix 40
AE4
C
51 72Right-handed alpha
Helix 41
AE5
C
77 97Right-handed alpha
Helix 42
AE6
C
100 129Right-handed alpha
Helix 43
AE7
C
134 152Right-handed alpha
Helix 44
AE8
C
152 186Right-handed alpha
Helix 45
AE9
C
200 208Right-handed alpha
Helix 46
AF1
C
208 230Right-handed alpha
Helix 47
AF2
C
231 239Right-handed alpha
Helix 48
AF3
C
243 269Right-handed alpha
Helix 49
AF4
C
272 290Right-handed alpha
Helix 50
AF5
C
292 296Right-handed 310
Helix 51
AF6
C
297 327Right-handed alpha
Helix 52
AF7
C
330 360Right-handed alpha
Helix 53
AF8
C
361 363Right-handed 310
Helix 54
AF9
C
364 387Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6KKK.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
C
389 391anti-parallel
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