Analysis of interatomic Contacts of Structural Units in PDB entry:
6KKN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KKN entry

There is 1 chain in PDB entry 6KKN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 16ILE 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6KKN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 29Right-handed alpha
Helix 2
AA2
A
32 46Right-handed alpha
Helix 3
AA3
A
49 57Right-handed alpha
Helix 4
AA4
A
60 80Right-handed alpha
Helix 5
AA5
A
83 93Right-handed alpha
Helix 6
AA6
A
94 100Right-handed alpha
Helix 7
AA7
A
105 119Right-handed alpha
Helix 8
AA8
A
122 137Right-handed alpha
Helix 9
AA9
A
149 165Right-handed alpha
Helix 10
AB1
A
169 182Right-handed alpha
Helix 11
AB2
A
184 197Right-handed alpha
Helix 12
AB3
A
233 239Right-handed alpha
Helix 13
AB4
A
266 272Right-handed alpha
Helix 14
AB5
A
283 285Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6KKN.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 263first strand
Strand 2
A
222 229anti-parallel
Strand 3
A
275 281parallel
Strand 4
A
295 301anti-parallel
Strand 5
A
334 342anti-parallel
Strand 6
A
312 316anti-parallel
Strand 7
A
321 325anti-parallel
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